Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1376 |
Symbol | |
ID | 4687282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1465278 |
End bp | 1466258 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834379 |
Product | lipid A biosynthesis acyltransferase |
Protein accession | YP_981612 |
Protein GI | 121604283 |
COG category | [R] General function prediction only |
COG ID | [COG4261] Predicted acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.227614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00151708 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCCGG CGCGCCATGC CGCAGCGCCG GCCAGCGCGC AATGGCAGAA AAATCCCGAG CGCAGCAGCC TGTTCATGCT GCGCGTGATG ACCTGGCTGT CGCTGCGGCT GGGGCGCGGT GCCAGCCGCG TTGTGCTGTA CGCCATCGCC GCCTACTTCC TGGCGTTTGC GCCGGCGGCC CGCCGCATGT CGCGCCTTTA TTTGCGCCGC GTGCTCAAGC TGCCGTCAAA CGCCGCCGTC GGGTGGCGGC ATCTGTTCCG GCATTTTTTC AGTTTTGCAT CGACTATTCA TGACCGGATT TATTTGCTCA ACGACCGCTT CGACCTGTTC GATATCCGCG TTCACAACCA GGCTCTGGTG GACGATGTTC TGGCCGACGG CCAGGGCCTT TTTCTGATCG GCGCGCACCT GGGAAGCTTC GAGGTGCTGC GGGCACTCGG CCGCAAGCGG CCCGGCCTGC GCGTGGCCAT GATGATGTAC GAGGAAAACG CCCGCAAGAT CAACGCGACG CTCAGCGCCA TCAACCCGAA TGCGCAGCAG GACATCATCG CCCTCGGCCA CATCGGCTCG ATGATCCAGG CCCATGAACT GCTGGCGCAA GGCACCATCG TCGGCATGCT GGGAGACCGC TCATTGGGCA ACGATGACAC CCGCCCCCTC AATTTCCTCG GCGATCCGGC CGAACTGCCG CTCGGCCCTT TTCGCATGGC GGCCATCATG AAACGCCCGG TGTTGTTCAT GACCGGCCTG TACCGGGGCG GCAACCGCTA CGACATCCAC TTTGAAACGC TTGCCGATTT CTCAGCCTTG CCGCCGCGCG GCCGGACGCT GGCGGTGGAG GCGGCCATGA CCCGTTATGC TGCACTGATG GAGCAGTACT GCCGCAGCGC GCCCTACAAC TGGTTCAACT TTTTTGACTT CTGGCAGGCA GCCGCGCCGC CATTGCCACG AAAAACCACC TCCTCCGCAG AAACCACCTG A
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Protein sequence | MKPARHAAAP ASAQWQKNPE RSSLFMLRVM TWLSLRLGRG ASRVVLYAIA AYFLAFAPAA RRMSRLYLRR VLKLPSNAAV GWRHLFRHFF SFASTIHDRI YLLNDRFDLF DIRVHNQALV DDVLADGQGL FLIGAHLGSF EVLRALGRKR PGLRVAMMMY EENARKINAT LSAINPNAQQ DIIALGHIGS MIQAHELLAQ GTIVGMLGDR SLGNDDTRPL NFLGDPAELP LGPFRMAAIM KRPVLFMTGL YRGGNRYDIH FETLADFSAL PPRGRTLAVE AAMTRYAALM EQYCRSAPYN WFNFFDFWQA AAPPLPRKTT SSAETT
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