Gene Pnap_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1376 
Symbol 
ID4687282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1465278 
End bp1466258 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content63% 
IMG OID639834379 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_981612 
Protein GI121604283 
COG category[R] General function prediction only 
COG ID[COG4261] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.227614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00151708 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCCGG CGCGCCATGC CGCAGCGCCG GCCAGCGCGC AATGGCAGAA AAATCCCGAG 
CGCAGCAGCC TGTTCATGCT GCGCGTGATG ACCTGGCTGT CGCTGCGGCT GGGGCGCGGT
GCCAGCCGCG TTGTGCTGTA CGCCATCGCC GCCTACTTCC TGGCGTTTGC GCCGGCGGCC
CGCCGCATGT CGCGCCTTTA TTTGCGCCGC GTGCTCAAGC TGCCGTCAAA CGCCGCCGTC
GGGTGGCGGC ATCTGTTCCG GCATTTTTTC AGTTTTGCAT CGACTATTCA TGACCGGATT
TATTTGCTCA ACGACCGCTT CGACCTGTTC GATATCCGCG TTCACAACCA GGCTCTGGTG
GACGATGTTC TGGCCGACGG CCAGGGCCTT TTTCTGATCG GCGCGCACCT GGGAAGCTTC
GAGGTGCTGC GGGCACTCGG CCGCAAGCGG CCCGGCCTGC GCGTGGCCAT GATGATGTAC
GAGGAAAACG CCCGCAAGAT CAACGCGACG CTCAGCGCCA TCAACCCGAA TGCGCAGCAG
GACATCATCG CCCTCGGCCA CATCGGCTCG ATGATCCAGG CCCATGAACT GCTGGCGCAA
GGCACCATCG TCGGCATGCT GGGAGACCGC TCATTGGGCA ACGATGACAC CCGCCCCCTC
AATTTCCTCG GCGATCCGGC CGAACTGCCG CTCGGCCCTT TTCGCATGGC GGCCATCATG
AAACGCCCGG TGTTGTTCAT GACCGGCCTG TACCGGGGCG GCAACCGCTA CGACATCCAC
TTTGAAACGC TTGCCGATTT CTCAGCCTTG CCGCCGCGCG GCCGGACGCT GGCGGTGGAG
GCGGCCATGA CCCGTTATGC TGCACTGATG GAGCAGTACT GCCGCAGCGC GCCCTACAAC
TGGTTCAACT TTTTTGACTT CTGGCAGGCA GCCGCGCCGC CATTGCCACG AAAAACCACC
TCCTCCGCAG AAACCACCTG A
 
Protein sequence
MKPARHAAAP ASAQWQKNPE RSSLFMLRVM TWLSLRLGRG ASRVVLYAIA AYFLAFAPAA 
RRMSRLYLRR VLKLPSNAAV GWRHLFRHFF SFASTIHDRI YLLNDRFDLF DIRVHNQALV
DDVLADGQGL FLIGAHLGSF EVLRALGRKR PGLRVAMMMY EENARKINAT LSAINPNAQQ
DIIALGHIGS MIQAHELLAQ GTIVGMLGDR SLGNDDTRPL NFLGDPAELP LGPFRMAAIM
KRPVLFMTGL YRGGNRYDIH FETLADFSAL PPRGRTLAVE AAMTRYAALM EQYCRSAPYN
WFNFFDFWQA AAPPLPRKTT SSAETT