| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1373 |
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| Symbol | |
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| ID | 4689294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1461483 |
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| End bp | 1462286 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834376 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_981609 |
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| Protein GI | 121604280 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00379023 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGATG CACGCTGGCA ACCAGGGCTT TTCCTGCGCG CCTCTGTCGC CCTGCATGGG
CTGGCCGTGG CCGCCATCAT GCTGAACCCC GGACAGTGGC GCTGGGCGCT GGGTGCCGTG
GCCGTCAATC ACCTGCTGAT CGCGGCCATC GGCCTGTGGC CGCGCAGCCA CTGGCTGGGC
CCGAACTGGA CGCGCCTGCC GGCCGCCGCC ACGGCCAGGA ATGAAATCGC CCTGACCATC
GACGACGGCC CCGACCCCGC AGTCACCCCG CAGGTGCTCG ATCTGCTGGA ACGCTATGGC
GCCCGGGCGA CCTTTTTTTG CATCGGCGAA AAGGCCGTTC GTTACCCGGA ACTGTGCCGG
GAAATCATCC GTCGCGGCCA TGCCATCGAG AACCACAGCC AGCACCATCG CCATCATTTT
TCCCTGACGG GCCCGCGTGG CATGCGGCGT GAAATACAGG CGGCCCAGGA CACGCTGACC
CGGGTTTGCG GCCAGCGCCC GCTGTTTTTC CGGGCGCCGG CGGGCCTGCG CAACCCTTTC
CTGGACCCGG TTCTGCATCA ACTGGGGCTG ACCCTGGCCA GCTGGTCAGC GCGCGGCTTC
GATACCCGCA TCAAGGATGC CGAACGCGTC AGGGACAAGT TATTGCCGGG CTTGCGGGCC
GGCGCCATTT TGCTGCTGCA TGACGGCAAT GCGGCCCGTA CCGCCAGCGG CACCCCGGTG
ATTCTCGACG TGCTGCCGGC GCTGCTGGAA CGCGCCGCAG CGGCCCGGCT GCGCACGGTG
ACCTTGCGGC AGGCCGTCTC TTGA
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| Protein sequence | MLDARWQPGL FLRASVALHG LAVAAIMLNP GQWRWALGAV AVNHLLIAAI GLWPRSHWLG
PNWTRLPAAA TARNEIALTI DDGPDPAVTP QVLDLLERYG ARATFFCIGE KAVRYPELCR
EIIRRGHAIE NHSQHHRHHF SLTGPRGMRR EIQAAQDTLT RVCGQRPLFF RAPAGLRNPF
LDPVLHQLGL TLASWSARGF DTRIKDAERV RDKLLPGLRA GAILLLHDGN AARTASGTPV
ILDVLPALLE RAAAARLRTV TLRQAVS
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