| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1366 |
|---|
| Symbol | |
|---|
| ID | 4686581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1455776 |
|---|
| End bp | 1456588 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639834369 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_981602 |
|---|
| Protein GI | 121604273 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000635595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACA AGTCGAATGC TTTACTGAAC AAGCAGGCCA GCGTGGCTGC CGATGGCAGA
GCCCTGCATG AAACCGTCAG GCTCTGCCTG GGCTACCTCG GCCTGGGGCT GATTTGCCTC
ACGGTGTCGG TCGTGGCCCT TCCGATGCGC ATGGCGCTGC CGAGGGTGTT GAGCAAACGG
TGGGGCCGCC AGCTGGTCGG CGCGACATTT CGCGTCTATC TGCGTTTTTT AAGCGTCATG
GGCGCCTGCC GCTTCGACTT GACGGCCCTC GACAGCCTGC AGGGCGCCCC GGCCATGATC
ATCGCGCCCA ACCATCCGTC ATTGCTCGAT GCCCTCATGA TCCTGTCGCG TCTTCCTGGC
GCGGTCTGCA TCATGAAGGC CGATATCGTG AACAGCCCTT TTTTTGGTGC CGGCTCCCGG
CTGGTCGGCT ACATCCGCAA CACGCCGCTT CGCACCATGG TGCAATTGGC AATCGCCGAT
TTGCACCAGG GCAGCCATCT GCTGCTGTTT CCCGAAGGCA CGCGCACCAG CCGCTTTCCC
GTGGGTGCCA TGCAGGGCAC CACGGGGCTG ATTGCCAAGC ATGCCGGCGT TGCGGTGCAG
ACGGTTTTCA TTGAAACCGA TTCGGGTTTT CTGGGCAAAG GCTGGTCCGT GTGGCGGACC
CCCAAAATGC CGATTACTTA CCGCATCCGG CTTGGCAAGC GCTTTGATCC GCCGCAGAAC
ACGGCGCTTT TTGTCAGTGA GCTGGAGCAG TATTTCCAGG CCGAGCTGGC GCATGCGCAA
TTGCCGGACT TTCCCGTGTC GCCTGCGTCT TGA
|
|---|
| Protein sequence | MDNKSNALLN KQASVAADGR ALHETVRLCL GYLGLGLICL TVSVVALPMR MALPRVLSKR
WGRQLVGATF RVYLRFLSVM GACRFDLTAL DSLQGAPAMI IAPNHPSLLD ALMILSRLPG
AVCIMKADIV NSPFFGAGSR LVGYIRNTPL RTMVQLAIAD LHQGSHLLLF PEGTRTSRFP
VGAMQGTTGL IAKHAGVAVQ TVFIETDSGF LGKGWSVWRT PKMPITYRIR LGKRFDPPQN
TALFVSELEQ YFQAELAHAQ LPDFPVSPAS
|
|---|
| |