Gene Pnap_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1364 
Symbol 
ID4687315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1452343 
End bp1453125 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID639834367 
Producthypothetical protein 
Protein accessionYP_981600 
Protein GI121604271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.734577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00420944 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACCAAT TCAACGGTTA TCTCTGGATG GCAGTGTTCG GTACCTTTGG TACGGTTGTC 
GTTGCTGCAT TGCTCTACGC ATGGCTTGCC CGGCGTGCAC TGCATATTCA GCAATCGATT
TTCGCCAACT GGCCGCTGTC CGAACGCCCG CTGGTCAACA CCGAGGAATG CCAGGTTTTG
CACTGGATGT GCAAAACCTT CCCCATGCAT CAGGTCAACA TCAAGATTCC GGTCACACGC
TTTACCCAGC CTCTTGAACG CAGGCAGGGA GAAAGCCTGC ACAAAATACT GGACGGGGTG
TACTGCACTT TTACAGTCTG CTCGCCAGAC GGACATGTCG TGGGTTGCGC GGACGTCATG
GGGGCCAATG GCCTGGCAAG CAGAAACCGG CAGCTCAAGC AAGCCTTGCT GGCCAAGTGC
GGCATTGCTT ATTGCGTTCT CAAACCCGTC AGTTTGCCGG CGCAAGCCGC GATTCGCAGC
GATTTTTTGG GCGAAACCGT TCCCGCCGAA CCCGTGTTCA AAATCAAGCC TCGCGAAGAA
CGCCATCGGG AACTTGAAGA AGCGCTGCTG GCCGAAGCCC GGCTCAAGCT CAGCACGGTG
CTAACCCGGC AACGCCGTAT CCGCGACAGC GAGTTCGCGC CCCTGGCGGC GAATTCATGC
AGCCATGCAG TGGCGCACGC CTCCCAAGGC AGCTTTGAGG AAGTCGATGC CAGCGGCCAC
GGCATGCTTT CGGGCTGGCA ACACAATTCT TTCCTTGCAC CGCTGGAAAG CCGGCCCCGC
TAG
 
Protein sequence
MNQFNGYLWM AVFGTFGTVV VAALLYAWLA RRALHIQQSI FANWPLSERP LVNTEECQVL 
HWMCKTFPMH QVNIKIPVTR FTQPLERRQG ESLHKILDGV YCTFTVCSPD GHVVGCADVM
GANGLASRNR QLKQALLAKC GIAYCVLKPV SLPAQAAIRS DFLGETVPAE PVFKIKPREE
RHRELEEALL AEARLKLSTV LTRQRRIRDS EFAPLAANSC SHAVAHASQG SFEEVDASGH
GMLSGWQHNS FLAPLESRPR