| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1359 |
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| Symbol | |
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| ID | 4686631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1445917 |
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| End bp | 1448529 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834362 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_981595 |
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| Protein GI | 121604266 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.219365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0149931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAG ACACACTCAA ACCCGGCGAA GCACCGGTGC GGGCCGCCCC CCACACGCCG
ATGATGACCC AGTACCACGC CATCAAGGCC GAGTATCCCG ACACGCTGGT GTTCTACCGC
ATGGGCGACT TCTATGAGGT TTTCTACGCC GATGCCGAGA AAGCCTCCAG CCTGCTCGAC
ATCACCCTGA CCAAACGCGG CCAGTCGGCG GGCGAACCGG TCGTCATGGC GGGCATCCCG
TTTCACGCGC TCGAAGGCTA CCTGGCCAAG CTCATCAAGC TGGGCGAGTC GGTGGCGATT
TGCGAGCAGG TCGGCGACGT GGCGACGGCC AAGGGGCCGG TCGAGCGAAA AGTGGTGCGC
GTGGTCACGC CCGGCACATT GACCGACACC GAACTGCTGA GCGACAAGAC CGAATCCATC
CTGCTGGCCG TGCACCAGGG CGCGCGCAAC ACCTGCGGCC TGGCCTGGCT CAGCGTGACG
CAGGGCGAGA TCCACCTGGC CCATTGCGCC AACGGCGAGC TGGAAACCTG GCTGGCCCGG
ATTGCGCCCA GCGAACTGCT CTACAACGTC GATGCCACGC CCGCGTTCGA GCAGCGCCTG
CAAACCCAGC GCTGCGCCGC CAGCGCCCGC CCGGCCTGGC AGTTTGACGC GGCCCTGGGC
GTGCGGCGCC TGCTGGACCA GCTCAAGGTC GCTTCGCTGG CCTCGTGGCA CGCCGAAGGG
CTGAATGAAG CGCACGCCGC CGCCTCGGCG CTGCTGGGTT ACGCCGAGCA CACGCAGGGC
CGCGCCCTGC CCCATGTGCA GGGCCTGCAG GTGGTGCGTT CGGGCGAGCT GATCGAGCTG
CCGCCGGCCA CGCGGCGCAA CCTCGAACTG ACGCAGACCC TGCGCGGCGA GGATTCGCCC
ACGCTGTTCT CGCTGCTGGA CACCTGCACC ACCGGCATGG GCAGCCGGGC GCTGAAAAGC
TGGCTGCTCA GCCCGCGCCG CGACCGCGCC CAGGCAGCAA GCCGCTTAGA GGCCATCACG
CAATTGCGCA GCGGCGCGCA GCAAACCTTG CGCACCCAAC TCAAGGGCTG CAGCGACGTC
GAGCGCATCA CCGCCCGCAT CGCGCTGCGC CAGGTGCGCC CGCGCGAACT CGTGGCGCTG
CAGCTGACGC TACAAAAAGC AGAGCTGCTC ACGCCCGTGG ATAGTGCGCA AATACCTCTT
TTGACCACTA TTTTCGAGGA TTTGCAGCCG CCCCTTGGCT GCGCCGAACT GCTGGGCCAG
TGCATCCTGG ACGAGCCGGC CGCGCTGATC CGCGACGGCG GCGTCATCAA CCACGGCCTT
GATGCCGAAC TCGACGAGCT GCGCGCCATC CAGACCAACT GCGACGGCTT TCTGCTCGAC
CTGGAAATCC GCGAGAAAGC CCGCACCGGC ATTGCCAACC TGCGCGTGCA GTTCAACAAG
GTGCACGGCT TTTACATCGA GGTCACGCAG GGCCAGCTGG ACAAGGTGCC GGCCGACTAC
CGCCGCCGCC AGACGCTGAA GAATGCCGAG CGCTACATCA CGCCCGAACT GAAAACCTTC
GAGGACAAGG CGCTGTCGGC GCAGGAACGC GCGCTGGCGC GCGAGAAGTG GCTGTACGAG
CAGTTGCTCG ACCAACTGCA GGAGTTCGTC CCCGCCCTGA GCCGGCTGGC GCGCGCCATT
GCCGCGCTCG ATGCGCTGTG CGCGCTGGCC GAGCGCTCGC TGACGCTGAA CTGGTGCGCG
CCAGTATTTG TGAAGGAGCC GTGCATCGCC ATCGGCCAGG GCCGGCATCC GGTGGTGGAG
GCGCGGCTGG CAGAGACGGG CGGCGGCGCC TTCATCGCCA ACGACTGCAG CCTGACTGGC
AAAAGCCGCA TGCAGATGAT CACCGGCCCC AACATGGGCG GCAAATCGAC CTACATGCGG
CAGGTCGCGC TGATCGTGCT GCTGGCCAGC GTGGGCTCCT ACGTTCCCGC CAGCGCCTGC
CGGCTCGGGC CGATAGACGC CATCCACACC CGCATCGGCG CGGCCGACGA CGTGGCCAAC
GCGCAATCGA CCTTCATGCT GGAGATGCTG GAGGCCGCGC AGATTTTGCA TGCCGCCACT
CCTTATTCGC TGGTGCTGAT GGACGAGATC GGGCGCGGCA CCTCGACCTT CGACGGGCTG
GCGCTGGCCG GCGGCATTGC CGCTTATCTG CACAACAAGG CGCAGGCCTT CACGCTGTTC
GCCACGCATT ACTTCGAGCT GACCGAGTTC GCGGCCCAGC ACCACGGCGC CATGAATGTG
CATGTCAGCG CGGTCGAGTC GGGCAGCGAC ATTGTGTTTT TGCACCACAT CGAGCCCGGC
CCGGCCAGCA AGAGCTACGG CATCGCGGTC GCCAAGCTGG CCGGCGTTCC CGCCGCCGTC
GTCAACCATG CGCGCCATGC GCTGGCCGCG CTGGAGGCCC AGCAAAGCCA GGCCAGCGCC
CAGGTGGACC TGTTCGCCGC GCCGCCCGAA GCGCCGGCAT CCGGGCAAAC CGCTATTGAC
AAGGCGCTGG CGAGCATAGA CCCTGATATC CTGAGCCCCC GAGAAGCGCT TGAAGCGCTT
TACCAACTAA AAAAACTGGC CAGCGCCGCC TGA
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| Protein sequence | MQKDTLKPGE APVRAAPHTP MMTQYHAIKA EYPDTLVFYR MGDFYEVFYA DAEKASSLLD
ITLTKRGQSA GEPVVMAGIP FHALEGYLAK LIKLGESVAI CEQVGDVATA KGPVERKVVR
VVTPGTLTDT ELLSDKTESI LLAVHQGARN TCGLAWLSVT QGEIHLAHCA NGELETWLAR
IAPSELLYNV DATPAFEQRL QTQRCAASAR PAWQFDAALG VRRLLDQLKV ASLASWHAEG
LNEAHAAASA LLGYAEHTQG RALPHVQGLQ VVRSGELIEL PPATRRNLEL TQTLRGEDSP
TLFSLLDTCT TGMGSRALKS WLLSPRRDRA QAASRLEAIT QLRSGAQQTL RTQLKGCSDV
ERITARIALR QVRPRELVAL QLTLQKAELL TPVDSAQIPL LTTIFEDLQP PLGCAELLGQ
CILDEPAALI RDGGVINHGL DAELDELRAI QTNCDGFLLD LEIREKARTG IANLRVQFNK
VHGFYIEVTQ GQLDKVPADY RRRQTLKNAE RYITPELKTF EDKALSAQER ALAREKWLYE
QLLDQLQEFV PALSRLARAI AALDALCALA ERSLTLNWCA PVFVKEPCIA IGQGRHPVVE
ARLAETGGGA FIANDCSLTG KSRMQMITGP NMGGKSTYMR QVALIVLLAS VGSYVPASAC
RLGPIDAIHT RIGAADDVAN AQSTFMLEML EAAQILHAAT PYSLVLMDEI GRGTSTFDGL
ALAGGIAAYL HNKAQAFTLF ATHYFELTEF AAQHHGAMNV HVSAVESGSD IVFLHHIEPG
PASKSYGIAV AKLAGVPAAV VNHARHALAA LEAQQSQASA QVDLFAAPPE APASGQTAID
KALASIDPDI LSPREALEAL YQLKKLASAA
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