Gene Pnap_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1355 
Symbol 
ID4686627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1442521 
End bp1443168 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID639834358 
Producthypothetical protein 
Protein accessionYP_981591 
Protein GI121604262 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.119247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC CCGCCTCCAT CCCGTCACTG AAACCCACCC TTCCCGCCGA GACTCCCGCC 
GAGGTTCTTG ATTTCTGGCT GGGTGACGGC CTGGCGCTGG GCTGGCCCAC GCACAACCTC
AACGAGCGCT GGTTTCTGGG CGGCGCAGCG CTTGACCAGC AGATCAAGGC CCGCTTTGGC
CCGAGCGTGG AGCTTGCCGT GCAAGGCGGT TTGCAGGATT GGGAGGCGCC GCTGCACAGC
CGGCTGGCGC TGGTGATATT GCTGGACCAG TTCACCCGCA ATGTGTTTCG CGGCTCTGCC
CGGGCTTTTG ACGGCGACGC GCGCGCCCAG CAACTGGTGC TGCGCACGCT GGCGCTTCAG
GAAGACCGGC AACTGCCGTG GGTGGGCCGC GTGTTCATGT ACATGCCGCT GATGCATGCC
GAAGATGCGG CCCTGCAGGA AACCTGCGTG GCCTGCTTTT CGCGGCTGGT GGCTGACGCG
CCGGACGCCC TGAAGCCGAA GCTGCAGGGC AATCTCGACT TTGCCCGCCA GCACCAGGAC
ATCATCCAGC GGTTTGGACG TTTCCCCTAC CGCAACGCGG CACTCGGGCG CAGCGACAGT
CCCGGGGAAG CAGAATTTTT GCGCAGCGGC CCGCGCTTTG GGCAATAA
 
Protein sequence
MTQPASIPSL KPTLPAETPA EVLDFWLGDG LALGWPTHNL NERWFLGGAA LDQQIKARFG 
PSVELAVQGG LQDWEAPLHS RLALVILLDQ FTRNVFRGSA RAFDGDARAQ QLVLRTLALQ
EDRQLPWVGR VFMYMPLMHA EDAALQETCV ACFSRLVADA PDALKPKLQG NLDFARQHQD
IIQRFGRFPY RNAALGRSDS PGEAEFLRSG PRFGQ