Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1343 |
Symbol | |
ID | 4686374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1432806 |
End bp | 1434041 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639834346 |
Product | geranylgeranyl reductase |
Protein accession | YP_981579 |
Protein GI | 121604250 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.263408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCCA GCATTGAATT ACTCCCCAAG ACGTGCGATG TCCTGGTGAT CGGCGCCGGC CCGTCCGGCA GCGCGGCCGC CTTCACCCTG GCCAAGACCG GGCTGGACGT GGTGCTGATC GACCAGCATG CCTTTCCCCG CGACAAGATC TGCGGCGACG GCTTGATCCC GGACGCGCAC AAGGCCCTTG ACCGGCTCGG CGTGCTTGAC GAGGTCATGC GCCAGGCCCA TTCATCCGAA TTTTTGAGCT GCATCAGCCC GCGCGGCGGG CGCATCGATG TGGCCGGAAC ACTGGCCGTG CTGCCGCGCA AGCAGCTGGA CGATATCGTC TGCAAGGCGG CCGTGGCGGC GGGTGCGCGC ATGTTCGCGC CAGTGCGTTT TACCGCGCCG ATCGAGGAAA ACGGCAAGGT GACAGGCGCG CGCCTGGCCC AGTCAGGCCA TGAGTGCGAA CTGCGGGCAA CCTGGGTCAT CCTGGCGACG GGCGCAGTCC CGCAGGCGCT GATGGCCGCC GGCATGGCGG AGCGGCACAC GCCCAGCGCC ATCGCGATGC GCTGCTACAT CAAGAACGAC GCGATGGCGT CCAGAATCGA CAAGCTGGAA GTTATCTGGC ACAAGGCGCT GGCGCCCGGC TACGGATGGA TTTTCCCGTG CGGCAATGGC GTTTTCAATG TGGGCGTCGG CATCCTGGCC GCGCCCGATG ACCCGGCGGG CAAGCGCGAT ACATCGCAGG GCAAGGCAGG CACCGCCAAT TTGCGCCAGA TGTTCGAAGC CCTCGGCACC CTGTCGGAGC CGGCCAGGGA ACTGATGGCG GGCGGCACGC GCCTGAGTCC GCTCAAGGGC GCGCCGCTGC GCTGCAGCCT GCAGGGGGCG CAACTGTCGC GGCCGGGCCT GCTGGTGACC GGCGAGGCCG CTGGCAGCAC CTACGCTTTT TCTGGCGAAG GCATCGGCAA GGCGCTGGAA ACCGGCATCC TGGCGGCAGA GGCGATCTTG CAGGGCGAGG GCGAGGCGCA GGTGCGCGCC CACTACCAAA GCCGGATTGA AGCGCTGCGG CCGCGCTTTG CGCTGTACGA GCGGGCCAAC CTGGTCAACA AATATCCGTG GCTGGCCGAT TTGCTGATCT GGCGGGCACG CAAAAGCGCG CGCCTGCAGC AGCGCCTGAG CGGGGTTCTG AACGAAACCA GCAATCCGGG CAGCCTGTTC ACCGTCAAGG GCTTTGTCCG GCTGTTTACC GAATAA
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Protein sequence | MNSSIELLPK TCDVLVIGAG PSGSAAAFTL AKTGLDVVLI DQHAFPRDKI CGDGLIPDAH KALDRLGVLD EVMRQAHSSE FLSCISPRGG RIDVAGTLAV LPRKQLDDIV CKAAVAAGAR MFAPVRFTAP IEENGKVTGA RLAQSGHECE LRATWVILAT GAVPQALMAA GMAERHTPSA IAMRCYIKND AMASRIDKLE VIWHKALAPG YGWIFPCGNG VFNVGVGILA APDDPAGKRD TSQGKAGTAN LRQMFEALGT LSEPARELMA GGTRLSPLKG APLRCSLQGA QLSRPGLLVT GEAAGSTYAF SGEGIGKALE TGILAAEAIL QGEGEAQVRA HYQSRIEALR PRFALYERAN LVNKYPWLAD LLIWRARKSA RLQQRLSGVL NETSNPGSLF TVKGFVRLFT E
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