Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1339 |
Symbol | |
ID | 4686120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1429632 |
End bp | 1430534 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639834342 |
Product | LysR family transcriptional regulator |
Protein accession | YP_981575 |
Protein GI | 121604246 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.150488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGAC TTGATGCCCT CAGGGCATTG GTGCTGTCAA AGCAGTGTGG CAGCTTTGCC GGGGCCGCGC GGGCCTTGGG CGTGACGCGT TCGCAGATCA GCAAACTCAT CGCTTCGCTG GAGGCGGACT ACGGCGGCGC GCTGTTTGCC CGCACCACAC GCTCCGTCGC CCTGACCAGC GCCGGCGCCA CCCTGCACAG CTATGCGCTG GAACTGCTGG CCATTGACGC CGAGGCGCGC GAAGCCATGG CCGCCTTGCA GGGCATGGTG GCCGGGCCAT TGCGTGTCAA TGCGCCGATG TCCTTTGGTC AATTGGTGCT GGCGCCGCTG CTGCCGGGCT TTCTGGCGCT GCATCCGCAA ATCGAGTTGC GCGTCGAGTT GAATGACCGG CTGCTCGATC CGTTCGAGCA CGGCTTTGAC CTGACGCTGC GCATTGCCGA GCTGGAGGAC TCTTCGCTCG CGGCGCGGCG CCTGTGCGGC GTGCCCCGGG CGATTTATGC CGCTCCCGGC TACCTGCAGG CGCAGGGCGT GCCGGACTCG CCGCAGGCAC TCAAGGCGCA CCGCTGCCTG AACTACGCGC ACACCAACAC CGGCCATGTG TGGCGCCTGG GCAGGGGCGG CGAAAAAGCG CATGTCGCCG TCGGCGGGCC GCTGTGCTCG AACAACGGCG AAGTGCTGCT GGAGGCCGCC ATGGCCGGCG CCGGGCTGAT CCTGCAACCG GCGTTTCTGG CGGCCGGGCA CCTCGCGTCG GGCCGGCTGG TGCCGGTGCT GGCGCAGTGG CAGGAGTCCC CGGAAATCGC CCTGTATGCG CTGTATCCGG CCACTCGCCG GGTGCCTGTC GCCGTGCGTG CCCTGATCGA CTACCTGGTC GCCACGCTGC CCCAGGCCAT GGCCGCGACC TGA
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Protein sequence | MDRLDALRAL VLSKQCGSFA GAARALGVTR SQISKLIASL EADYGGALFA RTTRSVALTS AGATLHSYAL ELLAIDAEAR EAMAALQGMV AGPLRVNAPM SFGQLVLAPL LPGFLALHPQ IELRVELNDR LLDPFEHGFD LTLRIAELED SSLAARRLCG VPRAIYAAPG YLQAQGVPDS PQALKAHRCL NYAHTNTGHV WRLGRGGEKA HVAVGGPLCS NNGEVLLEAA MAGAGLILQP AFLAAGHLAS GRLVPVLAQW QESPEIALYA LYPATRRVPV AVRALIDYLV ATLPQAMAAT
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