| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1335 |
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| Symbol | |
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| ID | 4687502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1425586 |
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| End bp | 1426251 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834338 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_981571 |
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| Protein GI | 121604242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.994233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.557471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCCGATA ATTCGGCCTC TCGCCACGAC TGGCCGACAG CCAGGCAATT CATCCATCAA
CCGACCGACA GCCCCTTGAC CCAACGGCAC GACGCTTCAC GCCTGATTCT CTTCAACAAG
CCCTACGGCG TGCTCAGCCA GTTCACGCCT GAAGGGCGGT GGCGCGGGCT CAAGGACTTC
ATCGCGATTC CCGGTGTGTA TGTCGCCGGC CGGCTGGATG CGGACAGCGA AGGCTTGCTG
CTGCTGGCCA ACGACGGCAA GCTCCAGGCG CATATTGCCG ACCCGCGCTT CAAGATGGAA
AAAATCTATT GGGTCCAGGT CGAAGGCACG CCCGGCGAGG CCGCGCTGCA AGCCTTGCGC
GAAGGCGTTG CGCTGAACGA TGGCCCGACC CGTCCGGCGC GGGCCAGGCT GATGGATGCG
CCGGCAGCAC TTTGGCAACG CGAGCCGCCG GTTCGCGTTC GCCAGTCCAT CCCGACCGCC
TGGATCGAAC TGGGCATTCG CGAAGGCCGC AACCGCCAGG TGCGGCGCAT GACGGCGGCC
GTGGGGTTTC CAACCCTGCG CCTGGTCCGC GCGGCCATCG GCAACTGGTC GCTCGACGGC
TTGGCGCCGG GAAGCTGGCG GGACCATGCA ATCGATCAGT TCAAGCCTTC ATCCACCACC
AGATAA
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| Protein sequence | MPDNSASRHD WPTARQFIHQ PTDSPLTQRH DASRLILFNK PYGVLSQFTP EGRWRGLKDF
IAIPGVYVAG RLDADSEGLL LLANDGKLQA HIADPRFKME KIYWVQVEGT PGEAALQALR
EGVALNDGPT RPARARLMDA PAALWQREPP VRVRQSIPTA WIELGIREGR NRQVRRMTAA
VGFPTLRLVR AAIGNWSLDG LAPGSWRDHA IDQFKPSSTT R
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