| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1312 |
|---|
| Symbol | |
|---|
| ID | 4687933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1404031 |
|---|
| End bp | 1404990 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639834315 |
|---|
| Product | GTP-binding protein, HSR1-related |
|---|
| Protein accession | YP_981548 |
|---|
| Protein GI | 121604219 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTC AGTGGTTTCC CGGTCACATG CACCTGACCA AAAAAGCTAT TGCAGAGCGC
ATCAAGGAAA TTGATGTGGT GATCGAACTG CTCGACGCCC GCCTGCCCGG CTCCAGCGCC
AACCCGATGC TGGCCGAGCT GACCGGCGCC AAGCCCGCGC TCAAGGTGCT CAACAAGCAG
GATCTGGCCG ACCCGGCGCG CACCGCGCTC TGGCTGGAGC ACTACAACAG CCAGCCCGGC
ACCCGCGCCA TCGGCCTGGA CGCCAGCATG AGCACGCCGG CCAAGGCGCT GATCGATGCC
TGTCACGCGC TGGCGCCGAC GCGCGGCAGC ATGGTCAAGC CGATGCGCGT GCTGATCTGC
GGCATTCCCA ACGTCGGCAA ATCCACGCTC ATCAACACCC TGACCGGCAA GCGCGCGACC
AAGACCGGCG ACGAGGCCGG CATCACCAAG GTCGAGCAGC GGCTGGTGCT GGCTGACGGC
TTTTACCTGT GGGACACGCC GGGCATGCTC TGGCCGCGCA TCATCGTCGC CAAGAGCGGC
TACAACCTGG CCGCCAGCGG CGCGATTGGC CGCAACGCGT TTGAAGAAGA AGAGGTGGCG
CTGGAACTGC TCGACTACCT GATTCCGAAC TACCCGCAAG CGCTGGCCGC GCGCTACAAG
CTGGAGTTGA CGCCGGGCAT CACCGACGAG CAAGTGCTGG AAGAAATCGG CCGCAAGCGC
GGTGCGGTTT TATCCAAGGG CCGCATCAAC CTGCAAAAAG CCGCCGAGAT CGTGATTTAC
GAATTCCGCG CCGCCACGCT GGGCCGCATC ACGCTGGAGA CGCCCGAGGA GTTTGCCCAA
TGGCTGGCTG CTGGGCAACT GCTGGACGCC GAGCGGCAGG TGAAAAAGGA CAAGATCGAA
ACCAGCCGCC TGATCAAGCT GAAGAAGATT CCCAGGCCGC CCAGGACCGA CGCTTCCTAA
|
|---|
| Protein sequence | MAIQWFPGHM HLTKKAIAER IKEIDVVIEL LDARLPGSSA NPMLAELTGA KPALKVLNKQ
DLADPARTAL WLEHYNSQPG TRAIGLDASM STPAKALIDA CHALAPTRGS MVKPMRVLIC
GIPNVGKSTL INTLTGKRAT KTGDEAGITK VEQRLVLADG FYLWDTPGML WPRIIVAKSG
YNLAASGAIG RNAFEEEEVA LELLDYLIPN YPQALAARYK LELTPGITDE QVLEEIGRKR
GAVLSKGRIN LQKAAEIVIY EFRAATLGRI TLETPEEFAQ WLAAGQLLDA ERQVKKDKIE
TSRLIKLKKI PRPPRTDAS
|
|---|
| |