| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1302 |
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| Symbol | |
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| ID | 4686417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1393739 |
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| End bp | 1394695 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639834305 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_981538 |
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| Protein GI | 121604209 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.905498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGC TCGCGCCCAT GGAAGGGCTG CTCGACTTCG TGCTGCGCGA CATCCTGACG
CGTGTGGGCG GCATTGACCG CTGCGTGTCC GAATTCATCC GCATCACCGA CCAGCTGCTG
CCCGAGCGCG TGTTCACCCG CATCGTTCCC GAGCTGCACA ACGGCGGCCG CACGCTGGCC
GGCGTGCCGG TGCGCGCCCA ACTGCTCGGT TCCGACCCGG TCTGCCTGGC TGAAAACGCC
GGACGGCTGG CCGAACTCGG GCCGGCCGGC ATCGACCTGA ACTTCGGCTG CCCGGCAAAA
ATAGTGAACC GGCATGGCGG CGGCGCGGCG CTGCTCGACG AGCCGGAAAC CGTTTTCGCC
ATCGTCGCCG CCGTGCGCCG CGCCGTGCCA AACCACATGC CGGTGTCGGC CAAGATGCGG
CTGGGCTTCA ACGACGACTC GCGCGCGGTC GAATGCGCGC TGGCGATTGC CGGCGCTGGC
GCGGACGAGC TGGTGGTGCA TGCCCGCACC AAGGCGCAGG CCTACCGCCC GCCCGCCTAC
TGGGAGCGCA TCGCCGACAT TCGCGCCGCC GTGCGCATTC CGGTGGTGGC CAACGGCGAA
ATCTGGACGG TCGATGATGC GCGCCGCTGC CGCGAGGCGT CGGGCTGCGA ATCGCTGATG
CTGGGGCGCG GTGTGGTGAC CGATCCGGGG CTGGGGCTGG CGATCAAGGC GGCCATGAAC
GGCGCTGCAT CGCCTGCGGG CGTTGCCTGG CCCCAGCTGG TGCCGCTGCT GGCCCAGTTC
TGGCACATCG TCTGCACCCG GCTCGATGCC CGCTCGCGCG CCGGCCGGCT CAAGCAGTGG
CTCAATTTCT TGCGCCGGCG TTTTCCCGAG GCCGAAATCG CCTATCAGCA GATCAGGACG
GTGAATGACC CGGCGCTGAT TGATGCGTGG CTGGCCGGGG TGGTGGCAGG TTTCTGA
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| Protein sequence | MILLAPMEGL LDFVLRDILT RVGGIDRCVS EFIRITDQLL PERVFTRIVP ELHNGGRTLA
GVPVRAQLLG SDPVCLAENA GRLAELGPAG IDLNFGCPAK IVNRHGGGAA LLDEPETVFA
IVAAVRRAVP NHMPVSAKMR LGFNDDSRAV ECALAIAGAG ADELVVHART KAQAYRPPAY
WERIADIRAA VRIPVVANGE IWTVDDARRC REASGCESLM LGRGVVTDPG LGLAIKAAMN
GAASPAGVAW PQLVPLLAQF WHIVCTRLDA RSRAGRLKQW LNFLRRRFPE AEIAYQQIRT
VNDPALIDAW LAGVVAGF
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