| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1301 |
|---|
| Symbol | |
|---|
| ID | 4686326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1392448 |
|---|
| End bp | 1393701 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639834304 |
|---|
| Product | methyltransferase small |
|---|
| Protein accession | YP_981537 |
|---|
| Protein GI | 121604208 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.967573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACCT TCTTTTCCGT GACCGCCGTC ACGCTTGCCG AATCAGCCGC CCCGGCCTCA
ACCCTTATTC AGTGGAAAGA AGCAGGGGTA GAGCATTCGG CGCTCTGGCG TTCCGAACGC
GGCGCGGCGC CGCCCCGGCG CATCGTCGAG GCCGACGACA CCATGGCCGC CGACACCGCC
TACCGGCTGG CCTGCGAAGG CACGGGCCTG CTCTGGCGCG GCGATTTCCA GAACGCCCGG
CAGATGGTGC AGGCGCTGGC CCGGCGCATC GACAAGCCGC CCAAAGCCTC CAAGCTGGCC
CGCGTCGCGA TCAAGAAAGC CGCCGACAAC GCCGCCTCGG GCGTTCCGGC CGGCCAGGAT
TTCCACCTGC ACCGCCAGGC CCAGTCGCAG CGCGCGCGCG TGCTGGGCAT GGTGCTGATC
GAGTTTGGCG CCGACTACGG CATTGACCTG CGCCGCGCGC CCGATGCCAA ACAGGCCTGC
GCCGAAGCCT GGGGCGTTGT CGGCGAGGGC GCCCAGCCCA GCGTGGCGTC GCTGCGCGAG
CTGATGGGCG TGATCAGCGC GCACGAGTGG CGCAAGAAGG GCGTTGAAAT TCCCGCCCTG
GGCAAGGCGC CGAACAACCG CATCCACCCG CATTACGGCG TGTTTTCGCC CGTGCGCGGC
GAGTACGTCG ATCTGGTCGC CAACGCCCCC TTGCCCGCCA ATCCAGGCTC GAAATTCGTC
GCCTTCGACA TCGGCACCGG CACCGGCGTG CTGTCGGCCG TGCTGGCGCT GCGCAGCGAG
GTCGATCAGG TCGTCGCGAC CGACCTGGAC CCGCGCGCGC TCGAATGCGC GCGCGAAAAC
ATCTACCGCC TGCGACTGCC GAACCCGGTC AAGGTGATGC AGGCCGACCT GTTTCCCGAG
GGACAAGCGT CGGTCATCGT CTGCAACCCG CCATGGCTGC CGGCGCGCCC CGGCTCGCCG
CTCGAAGGCG CTGTGTACGA CGAAGACAGC CGCATGCTGC TCGGTTTCCT CAAGGGCTTG
CCTGCGCATC TGGCCCCCGG CGGCGAAGGC TGGCTGATCC TGTCCAATTT CGCCGAACAG
CTGGGCCTGC GCACGCGCGC CGAGCTGCTC GCCGCGATCA AGGCCAGCGG CCTGAAGGTG
CTAGGCCGCA TCGACGCCAA GCCCGATCAT CCCAAGGCGG CCGATGCAAG CAACCCGCTG
CACAAGGCGC GTGCCGCCGA AGTCACGTCG CTCTGGCGCC TGGGCGCGGC CTGA
|
|---|
| Protein sequence | MPTFFSVTAV TLAESAAPAS TLIQWKEAGV EHSALWRSER GAAPPRRIVE ADDTMAADTA
YRLACEGTGL LWRGDFQNAR QMVQALARRI DKPPKASKLA RVAIKKAADN AASGVPAGQD
FHLHRQAQSQ RARVLGMVLI EFGADYGIDL RRAPDAKQAC AEAWGVVGEG AQPSVASLRE
LMGVISAHEW RKKGVEIPAL GKAPNNRIHP HYGVFSPVRG EYVDLVANAP LPANPGSKFV
AFDIGTGTGV LSAVLALRSE VDQVVATDLD PRALECAREN IYRLRLPNPV KVMQADLFPE
GQASVIVCNP PWLPARPGSP LEGAVYDEDS RMLLGFLKGL PAHLAPGGEG WLILSNFAEQ
LGLRTRAELL AAIKASGLKV LGRIDAKPDH PKAADASNPL HKARAAEVTS LWRLGAA
|
|---|
| |