| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1294 |
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| Symbol | |
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| ID | 4686881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1382867 |
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| End bp | 1384102 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639834297 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_981530 |
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| Protein GI | 121604201 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGC TCCAGGCTTT CAAATACGAA CTCATGCCCA GCGGCGAACA AACACGCCAT
ATGCGCCGCT TTGCCGGAGC GCGCCGCTTT GTGTTCAACA AGGCACTGGC ATTGCAGCAG
GCCCATCACG CCAGTGGAGG CAAGTTCATC GGCTATTTTG CGATGGGCAA GCACCTGACC
GCCTGGAAGC AGGAATCCCC CTGGCTCAAG GAATCGCCTT CCCAGGCCCT GCAGCAATCG
CTCAAGGATC TGGACAAAGC CTGGAAAAAC TTCTTTGCCA AACGCGCCAG CTTTCCTCGT
CCCAAAAAGA AAGGCCGTGG CGAAAGTTTT CGCTTCCCGC AAGGCTTCAA GATCGACCAG
CCCAACAGCC GCATCTTCCT GCCCAAACTG GGATGGATGC GCTATCGCAA CAGCCGCGAC
ATCCTGGGCA CGGTCAAAAA CATCACCATC AGCGAAGCAG GCGGTAAGTG GTTCGCCAGC
ATCCAGACTG AGCGGGAGGT GGAACAACCG ATTCCAGTCG CAACGATGGC CATTGGCATT
GATGTGGGCA TAGCGCGCTT CGCCACCATG AGCGACGGCA GCTTTGTTGC GCCGCTGTGC
AGTTTCAAAA AGCATGAAAA ACGCTTGGCG AAATACCAGC GGCGCATGAG CCGCAAAACC
AGATTCAGCA AAAACTGGCA CAAAGCCAAA AGAAAGGTTC AGAAAGTCCA CAGCCGGATA
GCCAACGCCC GAAAAGACTT CCTGCACAAA ACGACAAGCG CCCTCAGCAA AAACTTTCGC
GTGGTCGCCG TCGAAGATTT GCAGGTACGC AACATGAGCA AATCGGCAGC GGGCAATGCA
GACAAGCCGG GCAAAAACGT AGCCGCGAAG TCGGGACTGA ACAAGTCCAT CCTCGATCAA
GGCTGGTTTG AATTCCGGCG GCAGCTGCAA TACAAGCTCG ATTGGAACGG CGGCATTCTC
ATTGCCGTGC CGCCCCAGTA CACCAGCCAG ACCTGTCCGT GCTGCGGGCA TGTCGCCAAA
GAAAACCGAA AAACGCAAGC GAAGTTTGAA TGCGTCGATT GCGGCTACGA GAACCACGCC
GATGTCGTCG GCGCGATGAA TATATTGGCG CGGGGATACC GCGCAGCAGC CTGTGGAGAG
GACGGCTCTG GCCTTGCGCG CAAGCGCAAG ACGAAACCAG CCTCGGTGAA GCAGGAACCC
GCCGAAGCGG CTATGCAAGA GGCAACTCAT GTTTAG
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| Protein sequence | MKRLQAFKYE LMPSGEQTRH MRRFAGARRF VFNKALALQQ AHHASGGKFI GYFAMGKHLT
AWKQESPWLK ESPSQALQQS LKDLDKAWKN FFAKRASFPR PKKKGRGESF RFPQGFKIDQ
PNSRIFLPKL GWMRYRNSRD ILGTVKNITI SEAGGKWFAS IQTEREVEQP IPVATMAIGI
DVGIARFATM SDGSFVAPLC SFKKHEKRLA KYQRRMSRKT RFSKNWHKAK RKVQKVHSRI
ANARKDFLHK TTSALSKNFR VVAVEDLQVR NMSKSAAGNA DKPGKNVAAK SGLNKSILDQ
GWFEFRRQLQ YKLDWNGGIL IAVPPQYTSQ TCPCCGHVAK ENRKTQAKFE CVDCGYENHA
DVVGAMNILA RGYRAAACGE DGSGLARKRK TKPASVKQEP AEAAMQEATH V
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