Gene Pnap_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1291 
Symbol 
ID4687256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1380439 
End bp1381440 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID639834294 
Productalcohol dehydrogenase 
Protein accessionYP_981527 
Protein GI121604198 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TTGTTCTCGA GCGATATGGA AAAAAGCGCG CGTTGCGGTT GGCAGACATG 
CCGCAGCCGG AGTTGCGCGA TGACGAGGTC TTGATCCAGG TCCACGCCGC TGGCGTGAAC
CTGCTGGACT CCAAGATCCG GGGCGGGGAG TTCAAGCTCA TCCTGCCCTA TCGCCTGCCT
CTCATCCTGG GCCACGACGT TGCTGGGGTG GTCGTCAAGG TCGGCCCGCG CGTGCGGCAG
TTCAAGCTGG GCGATGAGGT CTATGCGCGG GCGGATGATT TCCGGATCGG CACGTTCGCT
GAATTCGTAC CCGTCAAGGA GGCTTCCCTG GCGCTCAAGC CCAAGGGGCT CACGATGGAA
GAAGCCGCTT CTATTCCCCT GGTGGCTTTG ACGGCCTGGC AGGCACTGGT CGAGAAGGCC
AAACTGAAGA AGGGGCAGAA GGTCTTCATT CAGGCTGGCT CCGGCGGCGT AGGCACTTTT
GCCATCCAGC TGGCCAAGCA TCTGGGCGCA ACCGTCGCCA CGACGACGAG CACGACCAAT
GTCGCGCTCG TGAAGAGTCT GGGCGTAGAC GTCGTCATCG ACTACAAGAC GCAGGACTTC
GAGGATGTCT TGCGCGACTA CGACGTGGTG CTGAACAGCC AGGATGGCAA GACGCTCGAA
AAATCCCTGC GCGTGCTCAA GAGCGGCGGA AAGCTCATCT CCATCTCCGG ACCGCCCGAT
CCCGCATTCG GCAAGGAAAG CGGAGCCCCC GGGTTCGTGA AACTGGTCAT GCGGCTGCTG
AGTTCAGGCG TCAGACGAAG GGCGAAAGGC CGAGGCATTG ACTACTCGTT CCTCTTCATG
AAGGCGAACG GGAGCCAACT GCGCGAGATC ACCCGTCTCT TCGATGCTGG CGTCATCCAC
CCCGTGATGG ACCGGGTCTT CCCGTTCGAA TCAACCAACG AGGCCATGGC CTACGTCGAA
GCAGGCCACG CAAAAGGCAA GGTCGTCGTC AAGATCAAGT GA
 
Protein sequence
MKAFVLERYG KKRALRLADM PQPELRDDEV LIQVHAAGVN LLDSKIRGGE FKLILPYRLP 
LILGHDVAGV VVKVGPRVRQ FKLGDEVYAR ADDFRIGTFA EFVPVKEASL ALKPKGLTME
EAASIPLVAL TAWQALVEKA KLKKGQKVFI QAGSGGVGTF AIQLAKHLGA TVATTTSTTN
VALVKSLGVD VVIDYKTQDF EDVLRDYDVV LNSQDGKTLE KSLRVLKSGG KLISISGPPD
PAFGKESGAP GFVKLVMRLL SSGVRRRAKG RGIDYSFLFM KANGSQLREI TRLFDAGVIH
PVMDRVFPFE STNEAMAYVE AGHAKGKVVV KIK