| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1274 |
|---|
| Symbol | |
|---|
| ID | 4687269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1364672 |
|---|
| End bp | 1365589 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639834277 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981510 |
|---|
| Protein GI | 121604181 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.6439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAA TTGACGAAGA TGTGATGCGG CGAATCCGCA ATGACCTGAT CGACAGCTAC
GACGAAGAAC TGGAGATGGA GCTTGAAGAC CAGACGGTGG CCCAGCTCAC AGGGGAAGAA
CCCATCAACT CAAGCGAGCA GGACAAGGAG CGCCGCCGCC AGTATTTTCG CGAGCTGTTT
CGCCTGCAGG GCGAACTGGT CAAGCTGCAG GACTGGGTGA TTGCCACCGG CCACAAGGTG
GTCATCCTGT TTGAAGGGCG CGATGCCGCC GGCAAGGGCG GCGTCATCAA GCGCATCACC
CAGCGCCTGA ATCCGCGCGT GTGCCGCGTG GCGGCGCTGC CCGCGCCCAA CGACCGGGAA
CGCACGCAAT GGTACTTTCA GCGCTATGTG GCGCATTTGC CCGCCGCCGG CGAAATGGTG
CTGTTTGACC GCAGCTGGTA CAACCGCGCC GGCGTCGAGC GGGTGATGGG CTTTTGCACC
GATGCGCAGT ACGAGGAGTT TTTCCGCACC GTGCCGGAGT TTGAAAAAAT GCTGGTGCGC
TCGGGCGTGC AGATCATCAA GTACTGGTTT TCGATCTCCG ACGACGAGCA GAACCTGCGC
TTTCTGGGCC GCATCCACGA CCCGCTCAAG CAGTGGAAGC TCAGCCCGAT GGACCTGGAG
TCGCGCCGCC GCTGGGAGGA ATACACCCGG GCCAAGGAAA TCATGCTGGA GCGCACGCAC
ATCGCCGAGG CGCCGTGGTG GGTGGTGCAT GCCGATGACA AGAAAAAAGC CCGGCTGAAC
TGCATTCACC ATCTGCTGGC GCAAATGCCC TACCAGGAAA CCCAGCATCC GCCCGTGGTG
CTGCCCGAGC GGATTCGTCA TGAGGACTAC GTGCGCCAGC CGGTGCCGCA GGACATCGTG
GTACCCGAGG TTTATTGA
|
|---|
| Protein sequence | MNSIDEDVMR RIRNDLIDSY DEELEMELED QTVAQLTGEE PINSSEQDKE RRRQYFRELF
RLQGELVKLQ DWVIATGHKV VILFEGRDAA GKGGVIKRIT QRLNPRVCRV AALPAPNDRE
RTQWYFQRYV AHLPAAGEMV LFDRSWYNRA GVERVMGFCT DAQYEEFFRT VPEFEKMLVR
SGVQIIKYWF SISDDEQNLR FLGRIHDPLK QWKLSPMDLE SRRRWEEYTR AKEIMLERTH
IAEAPWWVVH ADDKKKARLN CIHHLLAQMP YQETQHPPVV LPERIRHEDY VRQPVPQDIV
VPEVY
|
|---|
| |