| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1269 |
|---|
| Symbol | |
|---|
| ID | 4687569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1361153 |
|---|
| End bp | 1362544 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639834272 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_981505 |
|---|
| Protein GI | 121604176 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCTC CCCTGCCCGA TATCGAACTG TCCGAAGAAC TGATCCGCAG GTTCGACACG
CTCGGGCCGC GCTACACCTC CTACCCGACC GCCGACCGCT TCCACACCGG CTTTACCGAA
GCCTCGTATC AGGACCACCT CGCGCAGCGT GCCGGCAAGC CCGGCAACCC GCCGCTGTCG
ATCTATGTGC ACCTGCCGTT TTGCGAATCG CTGTGCTACT TTTGCGCCTG CAACAAGATC
ATCACCAAGG AACATGGCCG GGTCGCCGAA TACCTGCGCT ACCTCGACAA GGAAATGGCG
CTGGTGGCCG CGCAGATCGG CCCCGACCGC AAGGCGGTGC AGTTGCACCT GGGCGGCGGC
ACGCCGACCT TCTTCAACGC CGACGAACTC GGCCAGCTGA TGGCCATGCT GCGCCGGCAT
TTCGACTTCA CGCCGGATGC CGAGTTGGGC GTTGAGATCG ACCCGCGCAC GGTGGGCGAA
GGCACGCTGG CAATGCTGGC CGGGCTGGGC TTTAACCGCA ACAGCTTCGG CGTGCAGGAT
TTCGACCCGG CGGTGCAGCA GGCCGTCAAC CGCATCCAGC CGCTGGAAAT GGTCGAGAAA
GCCGTGGAGG AAAGCCGCAA GGCCAACTTC CAGTCGATCA ATGCCGACCT GATCTACGGC
CTGCCCAGGC AGACGCTGGA GAGCTTTGGC CGCACGCTCG ACAGCCTGAT CCGCGTCGCG
CCCGACCGCA TCGCGCTGTA CAACTACGCG CATCTGCCCC GGCGCTTCAA GGCGCAGCGG
CTGATCGTCG AAGCCGACCT GCCTTCGGCC GAGGAGCGGC TGCAGATTTT CCTGATGTCG
ATGCAGCGCC TGCTGGACGC CGGCTATGTC TATATCGGGC TCGATCATTT CTCGAAACCC
GACGATGAAC TGAACAAGGC GCGGCTCAAC AAGAGCCTGC ACCGCAACTT CCAGGGCTAC
ACCACGCGGG CCGAATGCGA TCTTGTAGGC TTTGGCGTGT CGGCCATCAG CAAGGTCGGC
AACTCCTACA GCCAGTCGGT GCGCACCGTC AACGCCTACT ACGAGCACCT CGACCAGGGC
CACCTGCCGA TTGAAAAGGG CTTTGAGTTG AGCCAGGACG ACGTGCTCAG GCGCGAGATC
ATCATGACGC TGATGTGCAG CGCGCCGGTG GACATAGCGG CCATCAACCA GGGCTACGGC
ATCGACTTCA ACCGTTATTT CGCGCACGAA CTGAGCCTTT TGAAGCAGTA CGAGGAAGCC
GGTCTGATCA CCATCGACCC GCAAGCCATC CGCGTCACCC CCAAAGGGCG GCTGTTCGTG
CGCGCCAGCG GCATGGTGTT CGACAGCTAC CTGACCCAGC CGACCACATC GACCTATTCC
AAGCTGATTT GA
|
|---|
| Protein sequence | MTSPLPDIEL SEELIRRFDT LGPRYTSYPT ADRFHTGFTE ASYQDHLAQR AGKPGNPPLS
IYVHLPFCES LCYFCACNKI ITKEHGRVAE YLRYLDKEMA LVAAQIGPDR KAVQLHLGGG
TPTFFNADEL GQLMAMLRRH FDFTPDAELG VEIDPRTVGE GTLAMLAGLG FNRNSFGVQD
FDPAVQQAVN RIQPLEMVEK AVEESRKANF QSINADLIYG LPRQTLESFG RTLDSLIRVA
PDRIALYNYA HLPRRFKAQR LIVEADLPSA EERLQIFLMS MQRLLDAGYV YIGLDHFSKP
DDELNKARLN KSLHRNFQGY TTRAECDLVG FGVSAISKVG NSYSQSVRTV NAYYEHLDQG
HLPIEKGFEL SQDDVLRREI IMTLMCSAPV DIAAINQGYG IDFNRYFAHE LSLLKQYEEA
GLITIDPQAI RVTPKGRLFV RASGMVFDSY LTQPTTSTYS KLI
|
|---|
| |