Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1244 |
Symbol | |
ID | 4687598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1334837 |
End bp | 1336552 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639834247 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_981480 |
Protein GI | 121604151 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG AAGAATTGAA TCTGGCCCCG GCCATTTTGA AGGCCGTGCT TGAGCAGGGC TACGATACCC CCACGCCGAT CCAGGCACAG GCTATTCCCG CCGTGCTTGC TGGCGGTGAT TTGCTGGGCG GCGCCCAGAC CGGCACCGGC AAGACGGCGG CGTTCACGCT GCCGCTGCTG CAGCGCCTCT CGACCGAACC GCGCCTGACC AACCGGCGCG GCGTCAACGC GGTTCGCGCC CTCATCATGA CCCCGACGCG CGAACTCGCC GCGCAGGTCG AGGAAAGCGT TCGCACCTAC GGCAAATACC TGGACCTCAC CTCGATGGTA ATGTTCGGCG GTGTCGGCAT GGGCGCGCAA ATCGAAAAAC TGCGCCGTGG CGTGGACATC CTGGTGGCCA CCCCCGGCCG CCTGCTGGAC CATGCCAGCC AAGGAACGCT GGACCTGAGC CAGGTGCAGA TCCTGATCCT CGACGAAGCC GACCGCATGC TGGACATGGG CTTCATCCAT GACATCAAGA AAGTGCTGGC ACTGGTGCCC AAGCAGAAGC AGACGCTGCT GTTTTCCGCC ACCTTCAGCG ATGAAATCCG CGAACTGGCC AATGGCCTGC TGCGCAACCC GCTGTCCATC CAGGTCACGC CGCGCAACAC CACGGTGCAG CGCATCACGC AGACCATCCA CCCGGTCGGC CGCAGCAAGA AGAAAGCCCT GCTGACGCAC ATCATCAACG AACACAACTG GAGCCAGGTG CTGGTGTTCA CGCGCACCAA GTTCGGCGCC AACAATGTGG CCGAGCATCT GACCAAGGCC GGCATTCCCG CCATGGCGCT GCACGGCAAC AAGAGCCAGA CGGCCCGCAC GCAAGCCCTG CAGGGCTTCA AGAACGGCGA CATCCGCGCG CTGGTGGCAA CCGACATTGC CGCGCGCGGC ATTGACATCG ACGAGTTGCC ACACGTCGTC AACTACGAAA TCCCGAACGT CAGCGAAGAC TATGTCCACC GCATCGGCCG CACCGGCCGC GCCGGCAACA GCGGCCAGGC CGTCAGCCTG GTGTGCCTGG ACGAAGAAGG CTTCATGCAG GACATCGAGC GCTTCACCAA GCAGAACATC GAAAACATCG TCGTTCCCGG CTTCGAAGCC GAACCCGGCG AAAAAGCCGA GCCGCTGGCC ATGGGCCGCC AGACCATCTG GGGCGGCCTG GGCAAGCCGC CAAGCCGCGA CGTGATGCAG GCCGCCGCCA AGGCAGCCCG GTCCGAAATG ATGACCCGCA TCCGCGACAC CAAGGGCGCC CAGCCTGCGC GTGGCGGCAA TGCCGGCGCG GGTGGACGCG GTGGCCGCGC CCCTGCCGGC AACAGCGCAG GCGCTGGCCG TGGCGGCAAT GGCGGTGGCG GCTTCGCCGG CAACGGTGGC GGCAATGCCG ACCGCCGTGG ACCGGCACCG CGCCAGAATG CCAGCTACCC ACAAGGCGGC CAGCCCGCTT TCAGCCAGCC ACGAAGCGCG CATGCCCCGG CGCCGCGCCA GCGCGACAGC GAGTCCCGCA ATGACTTCGA CAGCCAGCAG CCGGCCAGCC ACGCGTCGTC CGGATTCCCG TCGTCAGGCC AGCCCACAGG CAACCGCAAC AACTTCCGTG GCGGCCCCCG CACCGGCGGC GGCGCGGGTG ACCGAAGCAA CGGACCTCGC CGTTCAGGCG GCCCGGGCTC GTTCACCGGC CGATAA
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Protein sequence | MKFEELNLAP AILKAVLEQG YDTPTPIQAQ AIPAVLAGGD LLGGAQTGTG KTAAFTLPLL QRLSTEPRLT NRRGVNAVRA LIMTPTRELA AQVEESVRTY GKYLDLTSMV MFGGVGMGAQ IEKLRRGVDI LVATPGRLLD HASQGTLDLS QVQILILDEA DRMLDMGFIH DIKKVLALVP KQKQTLLFSA TFSDEIRELA NGLLRNPLSI QVTPRNTTVQ RITQTIHPVG RSKKKALLTH IINEHNWSQV LVFTRTKFGA NNVAEHLTKA GIPAMALHGN KSQTARTQAL QGFKNGDIRA LVATDIAARG IDIDELPHVV NYEIPNVSED YVHRIGRTGR AGNSGQAVSL VCLDEEGFMQ DIERFTKQNI ENIVVPGFEA EPGEKAEPLA MGRQTIWGGL GKPPSRDVMQ AAAKAARSEM MTRIRDTKGA QPARGGNAGA GGRGGRAPAG NSAGAGRGGN GGGGFAGNGG GNADRRGPAP RQNASYPQGG QPAFSQPRSA HAPAPRQRDS ESRNDFDSQQ PASHASSGFP SSGQPTGNRN NFRGGPRTGG GAGDRSNGPR RSGGPGSFTG R
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