Gene Pnap_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1242 
Symbol 
ID4687883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1333169 
End bp1334113 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content65% 
IMG OID639834245 
ProductUbiA prenyltransferase 
Protein accessionYP_981478 
Protein GI121604149 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.132119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.551644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCC CTGAACCCAG CCGGCAGCGT TTTGCCAATC CCTTGGTCCG GTACCTGGCG 
GCGACACGGC CTGCGTTTCT CAGCGTCACG CTTGCCGGCG CCCTGATCGG ACTGGGCAGC
GCCAGCGCCG ACGGCCTGGT GATTGACGTG GGAAAGGCAC TGCTGACCGT GTTGTTCGCG
CTCGTGGCCC ACGCAGGAGC CAATGTCATC AACGACTACC ACGATGCCCT GAGCGGTGCG
GATGCGGGCA ATCACGAACG CCTGTTTCCC TTTACCGGCG GCAGCCGGTT CATCCAGAAC
GGCGTCCTGA GCCTGCGCGA AACCCGGTTT TTCGGTTATG GCCTGCTGGC CGCAGTGATT
CCGGCGGGTC TCTGGCTGAC GGCGCATTCA GCTGGCGGGC TGATCTGGAT CGGCCTGGCC
GGCCTGCTGA TCGCCTGGGC CTATTCGGCG CCGCCCCTGC AACTGATGGC GCGCGGTGTG
GGCGAAGGCG CGATTGCCGG CGGCTGGCTG ATGGTGGTGC TGGGGACTGA TTTTGTCCAG
CGTGGAGAAT TTTCCGCACG CCCGCTGATT GCCGGCCTGC CTTTTGCGCT TCTGGTGGCA
GCCATTCTTT ATATGAACCA GTTTCCTGAT GCGCTGGGCG ATGCCCGCGC CGGCAAGCGC
ACGCTGGTCG TGCGCCTGGG AACGCAAAAA GCCCGCTGGG GTTATTTGGT TCTGACGGCT
GCGGCTTATC TCTGGCTGGC GGTCGCGGTC ATGGCGGGCG CCTTGCCGGC CTGGTCGGCC
TTGGGGCTTG TGCCGGCCGC GCTGTCTTTC ATGGCGTGCC GGCGGCTGCT TGCCGATGCA
GGCAAGCCGG TCCGGCTCGC GCCTGCCATC AAGGCAACCA TTCTTGCCGC GAATCTTCAT
GGCCTGTTGA TCTCCGTCGC GCTGGTGCTG AGCGCCAGGC TTTGA
 
Protein sequence
MNPPEPSRQR FANPLVRYLA ATRPAFLSVT LAGALIGLGS ASADGLVIDV GKALLTVLFA 
LVAHAGANVI NDYHDALSGA DAGNHERLFP FTGGSRFIQN GVLSLRETRF FGYGLLAAVI
PAGLWLTAHS AGGLIWIGLA GLLIAWAYSA PPLQLMARGV GEGAIAGGWL MVVLGTDFVQ
RGEFSARPLI AGLPFALLVA AILYMNQFPD ALGDARAGKR TLVVRLGTQK ARWGYLVLTA
AAYLWLAVAV MAGALPAWSA LGLVPAALSF MACRRLLADA GKPVRLAPAI KATILAANLH
GLLISVALVL SARL