Gene Pnap_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1239 
Symbol 
ID4688279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1331208 
End bp1331666 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content70% 
IMG OID639834242 
Producthypothetical protein 
Protein accessionYP_981475 
Protein GI121604146 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0187368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.565368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGC GAAATGGACA AGCCTATGCA CAGGATTTGC GCGACCGGGT GCTGGCCGCG 
CCAGGCGTGC TGCGCGAGGT CGCCGAGCGC TTTGGCGTGA GCCAGGCCTA TGTCTGCCGG
GCGCGGGCAC GCCGCGAGCG GCTCGGCCAG ACGGGCCCGG GCGCGCAGCA TAACCACATG
CCGCTGCGCC TGGCCGCGCT GGAGGGCGCG CTGCGCGAGC AGGTCGCCAG AGCGCCGGCG
CAGACGCTGC GCGAGCTGCG TCAGTGGGTG CGTGCCGAGC ACGGCATCGA GGTAGGCACC
ACCACGATGT TCAAGACCCT GAGGCGGTTC GGGCTGACGC TAAAAAAAAA TCACCCTGCA
CGCGGCCGAG CAAACGCGGC CCGACGTCGC CCAGGCCCGC CAGGACTGGA GCGCCAGACA
ACCAAGCCTG CCGGCCGCTC GGCTGATCTT CCTCGATGA
 
Protein sequence
MSWRNGQAYA QDLRDRVLAA PGVLREVAER FGVSQAYVCR ARARRERLGQ TGPGAQHNHM 
PLRLAALEGA LREQVARAPA QTLRELRQWV RAEHGIEVGT TTMFKTLRRF GLTLKKNHPA
RGRANAARRR PGPPGLERQT TKPAGRSADL PR