| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1236 |
|---|
| Symbol | |
|---|
| ID | 4688310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1326881 |
|---|
| End bp | 1328404 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639834239 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981472 |
|---|
| Protein GI | 121604143 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.694304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAA GCCAGGCACT CATGGATATT TTCAACCAGC TGCTGCAGGG CTTTGCCACC
GCAGCCACGC CCATCAACCT GATCTGGTGT TTTGTCGGCT GCGCCCTGGG AACCGCCATT
GGCGTGCTGC CCGGCATTGG CCCGGCCGTG GCGGTGGCCA TGCTGCTGCC GATCACCGTC
AAGGTCGAGG CCACGGCGTC GATGATCTTT TTCGCCGGCA TTTATTACGG CGCCATGTAC
GGCGGCTCGA CCACGTCCAT CCTGCTCAAT ACGCCGGGGG AAACGGCCAG CATGGTCACC
GCCATGGAAG GCAACCGGAT GGCCAAGAGC GGCCGGGCCG GGGCGGCGCT GGCAACGGCG
GCCATCGGCT CCTTTGTCGC CGGCTCGATT GCCACGGTGA TGGTCACGCT GTTTGCGCCC
ATCGTGGCTG ACCTGGCCGT CAAGCTGGGA CCGCCCGAAT ACTTCATGCT GATGCTGCTG
GCCTTCACCA CCGTGAGCGC GGTGCTGGGC AAAAGCACTG TGCGCGGCAT GACGGCGCTG
TTTGTCGGGC TGGCCGCGGG CCTGGTCGGG CTGGACCAGA TTTCGGCCCA GGCGCGCTAC
ACCGGCGGTG TTCCCGAACT GCTCGACGGC ATTGAAATCG TGCTGGTCGC CGTGGGCCTG
TTTGCCGTGG CCGAAGCCAT GTACGCAGTG CTGTACGAAG GCCGCATTGT CGAGTCGCAG
AACAAGCTGA GCCGGGTTCA CATGACGAAA AGGGACTGGC GCCGTTCCTG GCCTGCCTGG
CTGCGCGGCG CGGCCATTGG CGTGCCTTTT GGCTGCATTC CGGCCGGCGG CACCGAGATT
CCGACCTTTC TGAGTTATGC CACCGAAAAG AAGATGGCCA AGCCAGAAGA CCGCGCCGAG
TTCGGCAAGG CCGGCGCGAT TGAAGGCGTG GCCGGCCCGG AAGCTGCCAA CAATGCCACC
GTAACGGCGG CCATGATTCC GCTGCTGACG CTGGGCATTC CGACCTCGAA CACCACGGCG
ATTTTGCTGG GCGCCTTCCA GAACTACGGT ATCCAGCCCG GCCCGCAGCT GTTCACGACC
TCCTCGTCGC TGGTCTGGGC CTTGATTGCC TCGCTCTACA TCGGCAACGT GATGCTGCTG
GTGCTCAACT TGCCGCTGGT CGGCCTGTGG GTCAAGCTGC TGAAAATCCC CAAGCCTTAC
CTCTACGCCG GCATCTTGAT TTTCGCCACC GTCGGTGTGT ATGGCATGCG CCAGAGCGCG
TTTGATCTGT TCCTGCTGTA CGGCATTGGC GTGCTGGGCG TGGTCATGCG GCGCTTCGAC
TTTCCGACCG CGCCGGTCGT GGTCGGCATG ATCCTCGGGC CTCTGGCCGA GGCGCAGCTG
CGCAATGCGA TGTCGATTGG CGAGGGCAGC GCGATGGTGT TCATCCAGCG CCCGGTGTCG
CTGATCCTGA TCGTGGTGGT GGTGGCGATA TTGGTGCTGC CACGCCTGGC CAAGCGCTGG
GTGGCGCGCA AGGCTTTGGC ATGA
|
|---|
| Protein sequence | MALSQALMDI FNQLLQGFAT AATPINLIWC FVGCALGTAI GVLPGIGPAV AVAMLLPITV
KVEATASMIF FAGIYYGAMY GGSTTSILLN TPGETASMVT AMEGNRMAKS GRAGAALATA
AIGSFVAGSI ATVMVTLFAP IVADLAVKLG PPEYFMLMLL AFTTVSAVLG KSTVRGMTAL
FVGLAAGLVG LDQISAQARY TGGVPELLDG IEIVLVAVGL FAVAEAMYAV LYEGRIVESQ
NKLSRVHMTK RDWRRSWPAW LRGAAIGVPF GCIPAGGTEI PTFLSYATEK KMAKPEDRAE
FGKAGAIEGV AGPEAANNAT VTAAMIPLLT LGIPTSNTTA ILLGAFQNYG IQPGPQLFTT
SSSLVWALIA SLYIGNVMLL VLNLPLVGLW VKLLKIPKPY LYAGILIFAT VGVYGMRQSA
FDLFLLYGIG VLGVVMRRFD FPTAPVVVGM ILGPLAEAQL RNAMSIGEGS AMVFIQRPVS
LILIVVVVAI LVLPRLAKRW VARKALA
|
|---|
| |