Gene Pnap_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1223 
Symbol 
ID4689016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1313073 
End bp1313822 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID639834226 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_981459 
Protein GI121604130 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.181506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.15593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCT TGGTCCCTGT CAAGCGTGTA GTCGATTACA ACGTCAAAGT CCGCGTCAAA 
TCCGACGGCA GCGGCGTCGA TATCGCCAAT GTCAAGATGA GCATGAATCC GTTCGACGAG
ATTGCCATCG AGGAAGCCGT GCGGCTCAAG GAAAAGGGCG TTGTCACTGA AGTCATCGCC
GTCTCGTGCG GCGTGCTGCA GTGCCAGGAA ACCCTGCGCA CGGCCATGGC CATCGGCGCG
GACCGCGCCA TCCTGGTCGA GACCGGCGAA GAACTGCAGC CGCTGGCCGT GGCCAAGCTG
CTCAAGGCGC TGGTCGATAA AGAACAGCCA CAACTCGTCA TCCTGGGCAA GCAGGCGATT
GATGACGACT GCAACCAGAC CGGCCAGATG CTCGCCGCCC TGCTGGGCTG GGGTCAGGCG
ACGTTTGCCT CCAAGGTCGA AGTGGCTGAT GGCGTGGCCC GGGTCACGCG CGAGGTCGAT
GGCGGGCTGG AGACGCTCTC GCTCACGCTG CCGGCGATCA TCACGACGGA TTTGCGCCTG
AACGAGCCGC GCTACGTCAC GCTGCCCAAC ATCATGAAGG CCAAGAAAAA GCCGCTGGAA
AATGTCAAGC CAGCCGATCT GGGCGTCGAT GTGGCCCCGC GCATCAAGAC GCTCAAAGTC
AGCGAGCCGC CCAAGCGCAG CGCCGGCATC AAGGTCGCTG ACGTCGCCGC GCTGGTGGAC
AAGCTCAGGA ACGAAGCCAA AGTCATCTAA
 
Protein sequence
MKVLVPVKRV VDYNVKVRVK SDGSGVDIAN VKMSMNPFDE IAIEEAVRLK EKGVVTEVIA 
VSCGVLQCQE TLRTAMAIGA DRAILVETGE ELQPLAVAKL LKALVDKEQP QLVILGKQAI
DDDCNQTGQM LAALLGWGQA TFASKVEVAD GVARVTREVD GGLETLSLTL PAIITTDLRL
NEPRYVTLPN IMKAKKKPLE NVKPADLGVD VAPRIKTLKV SEPPKRSAGI KVADVAALVD
KLRNEAKVI