| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1217 |
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| Symbol | |
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| ID | 4688880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1305669 |
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| End bp | 1307738 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639834220 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_981453 |
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| Protein GI | 121604124 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.726162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.124375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCC CCGCCGCAGC CCCATCGACC CAACTGCCGA CCCTGGCGAC GCTGCGAACG
CTGCCGCGCG AAGGCCGCGA CACGCTGTTC CTGCTGGCCG TGATTGCCTG GCTGCTGCTG
CCGCAGGCCG GCCGCTTGCC GCTGTGGTGC AGCCTGGGCG CGGGCGCGGT GCTGCTGTGG
CGCGGCTGGC TGGCGCTGAA TGCACGCGCC CTGCCCCGCA AGGCATGGCT GGTGCTGCTG
CTGGCGCTAA CCATGGGCGC CACCTACGCC ACGCACGGCA CGCTGATCGG GCGCGACGCC
GGCGTGACGC TGCTGGTGGT GCTGCTCACG CTCAAGACGC TGGAGCTGCG CGCCCGGCGC
GATGCGTTCG TGATTTTCTT CCTCGGCTTT TTCTGCATGC TGAGCAACTT CTTCTATTCG
CAGTCGCTGC TGACGGCCTG CAGCATGGTG CTCGGGCTGC TGGGCCTGCT GACCGCGCTG
GTCAATGCCC ACATGCCGGT CGGCAAGCCG CCGCTGGCGC AGGCCGCCCG AACCGCCGGC
TCGATGGCGC TGCTGGGCGC GCCCATCATG CTGGTGCTGT TCATGCTGTT TCCGCGCATG
GCGCCGCTGT GGGGTGTGCC CAGCGATGCC ATGACCGGCC GCAGCGGCCT GAGCGCGCGC
ATGGAAGTCG GCACCATGGC CACGCTGGCG CTGGACGACA GCGTGGCGAT GCGCATCCGC
TTCGAGGGCG AACCCCCGCC GCAGCGCGAG ATGTATTTTC GCGGCCCGGT GCTCTCCAGC
TTTGACGGGC GGCAGTGGCT GCCCCTGAAC TCCAGCCAGT CGCCCGTGCA TGCGCTGCCG
GCCAACCTGC AGGCAAGCGG CGAGCCGGTG CATTACGAAG TCACGCTGGA GCCGACCCAG
CGGCCCTGGC TTTTCGTGAT GGAAGCCGCC TTGCAGCGCC CCGAGGTGCC CGGTTACCGC
AACTTCATGG AAGACGACTT GCAGTGGCTG ACCAGCCGGC CCATCACCGA GCTGGTCCGC
TACAAGGTCA GCAGCTACCC GGCCTTCACC CACGGACCCG CGCAGCCCAT GCGCGGGCTG
CAGGAATATG TCGATTTGCC GCCGGGCTTC AACCCGCGCA CGCTGGCCCT GGCCGCCGAG
ATACGGCGCG ACCCGCGCAA TGCCAAGGCC ACTACCGCTG GCCTGGTGCA GGTCGCGCTG
GAGCGGCTGC GCACTGGCGG CTATACCTAC ACGCTGGAGC CCGGCGTGTA TGGCCGGGAC
ACCGCCGACG AGTTCTGGTT TGACCGCAAG GAAGGTTTTT GCGAGCACAT CGCGTCCAGC
TTTGTCATCT TGATGCGCGC GCTCGACATT CCGGCGCGCA TCGTCACCGG CTACCAGGGC
GGCGAGCGCA ACGGCGTTGA CGGCTTCTGG GTCGTGCGGC AAAGCGATGC CCACGCCTGG
GCCGAGGTCT GGCAGGCCGG GCGCGGCTGG GTGCGGGTCG ATCCGACCTC GGCCGTGGCG
CCGGGACGCA CCGGCGCCTT CCAGCGGCTG GCCGCGCCCC GGGGCGCCGT CGCGCAGGCC
TTCGGCAATT TCAGCCCGAC CCTGTCGGCC CAGTTTCGCG CCACCTGGGA AGCGATCAAC
AACGGCTGGA ATCAGTGGGT TCTCAATTAC ACCCAGGGCA AGCAGCTCAG TTTGCTCAAG
AACATCGGCT TTGAAACCCC GGACTGGCTG GACCTGACCC GCCTGCTGAT AGGCGCGCTG
GTGCTGGCCA GCATCGCGGG CGGCGGCTGG GCATGGTGGG AGCGCAGCCA GCACGATCCG
TGGCTGCGCC TGCTCGGCCG GGCACGCAAG CGGCTGGCGC AGGCCGGCAT TGAAAGCACG
CCCGCCACCT CGCCGCGCCA GCTGGCCCGG CAGGTGCTGC AACAATACGG CGACCAGGGG
CAAGCCCTGC ACGACTGGCT GGTGCAGCTG GAGGTGCAGC GCTATGCCCC GACGGCCCAA
ACCGCCAGGC CATCCACCCC GCTGAAAAGC CATGTCCGCC AGCTGGACCA GCTCCGGCAG
CAATTCAGCC GCCTGCGCTG GCCTGCTTAA
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| Protein sequence | MLSPAAAPST QLPTLATLRT LPREGRDTLF LLAVIAWLLL PQAGRLPLWC SLGAGAVLLW
RGWLALNARA LPRKAWLVLL LALTMGATYA THGTLIGRDA GVTLLVVLLT LKTLELRARR
DAFVIFFLGF FCMLSNFFYS QSLLTACSMV LGLLGLLTAL VNAHMPVGKP PLAQAARTAG
SMALLGAPIM LVLFMLFPRM APLWGVPSDA MTGRSGLSAR MEVGTMATLA LDDSVAMRIR
FEGEPPPQRE MYFRGPVLSS FDGRQWLPLN SSQSPVHALP ANLQASGEPV HYEVTLEPTQ
RPWLFVMEAA LQRPEVPGYR NFMEDDLQWL TSRPITELVR YKVSSYPAFT HGPAQPMRGL
QEYVDLPPGF NPRTLALAAE IRRDPRNAKA TTAGLVQVAL ERLRTGGYTY TLEPGVYGRD
TADEFWFDRK EGFCEHIASS FVILMRALDI PARIVTGYQG GERNGVDGFW VVRQSDAHAW
AEVWQAGRGW VRVDPTSAVA PGRTGAFQRL AAPRGAVAQA FGNFSPTLSA QFRATWEAIN
NGWNQWVLNY TQGKQLSLLK NIGFETPDWL DLTRLLIGAL VLASIAGGGW AWWERSQHDP
WLRLLGRARK RLAQAGIEST PATSPRQLAR QVLQQYGDQG QALHDWLVQL EVQRYAPTAQ
TARPSTPLKS HVRQLDQLRQ QFSRLRWPA
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