| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1211 |
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| Symbol | |
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| ID | 4689318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1295249 |
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| End bp | 1301224 |
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| Gene Length | 5976 bp |
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| Protein Length | 1991 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834214 |
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| Product | putative DNA helicase |
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| Protein accession | YP_981447 |
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| Protein GI | 121604118 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.455109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATT TGCAGAACGA CCCCCTGGCC ATGAACGGCG CGATGGCGGA CGATCCCGCC
GCCGCCCCTG AAGCACAAAT CCGGATCGAC ATCGAGGCCG ATGCCACGAC CGGCTATGCC
GCGATACAAA ACGCCGTTCC GGTCGTGCGG GCGCTTCGGC TGACCAACCT GATGGCTGAG
ACGGTTGAAA ACCTGGAGGT CGTGGTGTCC TGCAGCCCGG CGTTTGCCCG GGGCCTGAAG
CTGCGCTTTG ACAAGCTGGC CGCTGGCGAG ACGCGCCGCA TCTCGCCGCT GGACCTGCAG
CCCGACCATG CCTTTCTGGC GGACCTGAAG GAGTCGGTCA ACGCCTCGAT CCGGGTCGTG
GCCGAAGCCG GCGGCCAGGA ACTGGCCAGC GCCACCCAGC CGGTCCAGGT GCTGGCCTAT
GACCAGTGGG CCGGAACGCG CGCGCTGCCC GAGTTGCTGG CGGCGTTTTG CATGCCCAAC
AACCCGGCCG TCGATGTGCT GATCGGCAAG GCCTCCAGGC TGTTGCGCGC CAGCCATCCC
GAGCTGTCGA TGAACGGCTA CCAGTCCAAG AACCGCGATG TGGTCTGGAA GCAGGTCTCC
AGCATCTACA GCACGATTGC CGCCGAGAAC CTGCAGTATG TGGAGCCGCC GGCCTCGTTC
GGCGCCGACG GCCAGAAAAT CCGCATGCCC GACCGCATTT TGGATGCGCG CGTCGCCACC
TGCCTGGATT TGGCGATGCT GTTCGCCTCG TGCCTGGAGC AGGCCGGCCT GCGCCCGGTC
ATTCTGCTCA AGGAGGGCCA TGCCTGGGTC GGCGTCTGGC TGCACCTGGC GTCTTTTTCG
GACGCGCTGA TCGACGACGT GCAGGCCATC CGCAAGCGGG TGGACAGCGG TGAATTCCTG
GTGTTTGAAA CCACGGGCGC GGCTCGGCAT GCCAGTTCGC GGCCATCGCT GCGGATTGCC
ATGGAGCAGG GCCACGCCCA CCTGCTCGAA GACGCCAGCT TTCGCTATGC GATTGACATC
CACCGCGCCC GCGAAGTGCA GATCAAGCCG CTGCCGTCGC GCGCGCTTCC CCTGATACCG
GGCGAGCTGG CGCCCGAGGA TGCGCCTGCG GCCATCGAGC CGATGCCGCT GCTGCCGCCG
CTGGACTCCG ATTCGCTGGC GCCGCTGGAT GTGCGCGCAG ACGACACGCC CGAAGGCCGG
CTGTCCACCT GGAAATCCCG GCTGCTCGAC CTGACGCTGC GCAACCGGCT GCTCAATTTC
AAGCCGACCA AGGCCACGCT GCAACTGGTG GCGCCCGAGC TGGCCCGGCT CGAAGACGCG
CTGGCCGACG GCGCCGAGTT CAAGATCAGG CCGCTGCCCG ACCTCATGGA AGGCGCCGAT
CCGCGCATGG CCGAGCTGCA TACCCAGCGC GCCGGAAGCA CGCCGCTGGA CGACATGGCG
CTCGAAGCGC TGGGCAACCG GGAATTGCTC GCCCGGGCTT CAAAGGATGC GCTGGATGGC
AACCTGCTGG CCATCTACAG CGCCGCCCGC ACCGGGCTGG AGGAGGGCGG CGCCAACACG
CTGTACCTGG CGCTGGGCCT GCTGCGCTGG ACCGAAGCCG AAAAGGCCGA TGCGGTGCAT
CTGGCGCCGC TGCTCCTGAT CCCGGTCACG CTGCAGCGCC AGTCGGTGCG CAGCGGCTTT
CGATTGATAC GGCATGACGA CGAGGCCATC GTCAACCCGA CGCTGCTGCA TCTGCTGAAA
ACCAGTTTCG AGCTGAAGGT GGCCGGCCTG GATGTGGTGC CGACCGACGA CAAGGGCGTC
GATGTGGCCC GGGTGCTGCA GTCCTTCCGG CTGGCGGTGC GCGAGATTGC GCAATGGGAA
GTGCTGGAGC AGGCGCACCT GGGCATTTTT TCGTTCACCA AGTATTTGAT GTGGAAGGAT
TTGCAGGACC GCACCGAGCA GCTCAAGCAA AGCCGCGTCG TCAGGCATTT GATCGACAAG
CCCGGCGAGG CATTTGCGCG CGAAGGCACG GACGGCGAAT TCGACCGGCT CGACATCACC
CATCGCCCCC AGGACATCCT CACGCCGCTG CTGTCCGACT CGTCGCAGCT CAAGGCGATT
TGCGCGGTTG ATGCCGGGCG CGACCTGGTG CTCGAAGGCC CGCCGGGCAC CGGCAAGAGC
CAGACCATCA CCAACCTGAT CGCGCACAGC CTGGCCAAGG GCAAGACGGT GCTGTTCGTG
TCGGAAAAGA TGGCGGCGCT CGAAGTGGTG CACCGGCGCC TCTCCAGCAT CGGGCTGGGA
CCGTTTTGCC TGGAACTGCA TTCGTCCAAG GCCAAGAAGA CCGACGTGCT GCAGCAGCTC
GGCAAGTCGC TGGCCATCAG CGCCCAGCGC ACGGCCGATG ACTGGGCGCG CGAAGCCGGG
CGGCTGGGGC AGATGCGCCA GTCGCTCAAC GGGCTGGTCG ATTCGCTGCA CCACGAGTAC
CCGAATGGCT TCACTGTCTT TGAAGCCACC GGAACCTGCA TAGCCCATAC CGGCAAGGAA
GCTTCGGCCA TGCCTTGGCT TGATCCCTTG ACGCACGACC GGGCCGACCT GGACCGGCTG
GAGGAAACCG CCCGGCGCAT GGCCTCGCTG GCCGGTGCGC TGCCGACGCT GGAGAATCAT
CCTCTGTCCC TCATCGGGCA GACCGACTGG TCGAATTCAT GGCAGGACGA GTTGCTGGGC
GCCGCCAAGG CGCTGGAAGC CGCCATTCGC TCCCTGCAGG AAAAATCACC GGCCTTGGGA
AGTTTGACCG GCCAGCCCAC CACCGGCCTG AGCCTGGACG CCTATGCCGC GCTCGACCAG
CTGGCCGACG TGCTGCTGCT GGCGCCCGGC GTGCCCGCAG GCCTGGCCGG GCAGGCGCAT
GACCCGGGCG CGCGGGCGCG CGTGCATGCG CTGGCGCAGC ACGGCCTGGC GCGCAACCAG
CACTGGCAGC AAATCGGCCC CGGCTGGACG GAGCAGGTCG CCACGCTCAA TGCGGTGGAG
CTTCAGGGGC AATGGGCGCA GGCCAGCTCC GACTGGTGGC CCAAGTCCAT GCTGGCCCAG
CGCGCCCTCA TCGGTCGCCT GAGCGGATTT CGCACCGACA GCCAGCGCCC GGGCGAGGCC
GATGTGCAGG CCCTGCTGGC ACCGCTGGCG GCGCTGAATG AGGAAGACCG GGTGCTGCGC
AGCCTGCAGG CGGACGCCGA GGCGCTGCTG CAGGAGTCTT ACGCCGGCCT CAAGACCGAC
TGGGCCAGCC TGGCCGCTCA TGAGTTGTGG GCGAAGAAGT TCGCCGATGC GGTGACGCGG
GTGGCCGGGG CTGATCTGGC GCAGGTCAAT CCGCTGCATC AGGCGCTGGC GCCGCTGGTG
TCGAGCAACC GCGCGGCCCT GGCCGCCGGC GGCCAGGCCG GCCGCGCGCT GCTGGCCTAC
CGCGACGCCT GGCGGGAATT CAGCCAGAAA TTCGATGCGC TGGAAACCCT GGCCCAGCCG
GTCGATCCCT TGCAGGGGCC TGATGGCGCG CAAGGCGCGC TGGAACGCAT CCAGGGCGTG
CTCAGCGCCT GGCAACTCAA CCGGCGGCTG ATCCAGCCCT GGTGCCTGTG GCGCAATGTC
CGCGAGCAGG CGATGGACCA GGGCCTGCAG GCGCTGGTCG CCAGCCTTGA AAACGGGGAA
GTGCCCCTGG GCGAGGTGGA GTCGCATTTC AAGTTCAGCT ACCGCAACTG GTGGCTGAAA
AAAACCATTG ATCGCGACCC GCTGCTGCGC GGCTTTTCCA GCGCCGACCA TGCGCGCAAG
ATCCACGAGT TCCGTGATGC CGATGTGCGC TTCCAGAAGC TGACCGAGGA TTACATCGTC
GCCACCCTGT CCGGGCATAT CCCTTCGCTG GCTGGCAGCG CGGTCGGCCC CGACAGCGAG
CTGGGCCGCT TGCGGCGCGA GCTGCAAAAA AAGAGCCGGC AGATGCCGGT GCGCCAGTTG
GTTCGCGGCC TGCCGACCCT GCTGCCCAAG CTCAAGCCCT GCCTGCTGAT GTCGCCGCTG
TCGGTCGCGC AGTACCTGGA CGCCGGCTAC GCGCCGTTTG ACCTGGTGGT CTTCGACGAA
GCCTCGCAGA TTCCGGTCTG GGATGCCATC GGCGCGATTG CCCGTGGCCG GCAACTGGTG
GTGGTGGGCG ATGCCAAGCA ATTGCCGCCG ACCAGCTTTT TCAGCAAGTC AGGCGACCCG
GAAGGCGGAG CCCATGGCAT GGGTGAGGAG CCGGTGGAAG ACCTGGAAAG CATCCTCGAC
GAATGCCTGG GCGCCGGCAT GAACCGGCTA AGCCTGCAGT GGCATTACCG CAGCCGCCAC
GAAAGCCTGA TCACCTTCAG CAACGTCAAC TACTACGACT CCAGCCTGAT CACCTTTCCC
TCGCCGGTCA CCGACGACAG CGCGGTGCGC TTCGAGCATG TAGCCGGGGT CTATGACCGG
GGCGGCAGCC GCACCAACCG GCTTGAAGCC GACGCGATTG TCGAGGGCAT CGCCGAGCAT
TACCTGTCGC CGCACAAGAA GCACCTGACG CTTGGCGTGG TGACCTTCAA CCAGCCCCAG
CAACTGCTGA TTGAAACGCT GGTCGATGCC CGGCGCCGCG CCAGCCCGGA ACTCGACCGC
GCCATCGCGG CGCGCGCCAA CGAGCCGTTG TTCATCAAGA ACCTGGAAAA CGTGCAGGGC
GACGAGCGCG ACGTGATCTT TTTCTCGATC ACCTACGGCC CGGACGCGGC CGGCAAGACG
ACCATGAACT TCGGGCCGCT CAACGGCGAG GGCGGGCAGC GCCGGCTCAA TGTCGCGATT
TCGCGGGCGC GCGAAGCCGT CGTCATCTAC AGCACCCTGA GGCCCGAGCA GATCGACCTG
GCCCGCGTGC GCGCCGCCGG CGTGCGCGAC CTCAAGCATT ACCTGGAGTT CGCCATCAAG
GGCTACCGCG CGCTGGCCGA GCAGAGCCTG CCGACCGGCC AGGAGCCCGA CAGCCCGTTC
GAGGTCGCGG TGATCCGCCT GCTGCGCAAG CACGGCTGGG AGGTGCATCC GCAGGTCGGC
TGCTCGGGCT ATCGGCTAGA CATCGGCGTG GTCGATCCGC GCGCGCCGGG CCGCTACCTG
GCCGGCATCG AATGCGACGG CGCGACCTAC CATTCGGCCG CCACCGCGCG CGACCGCGAC
CGCCTGCGCC AGCATGTGCT CGAAGGCCTG GGCTGGCACA TTCTGCGCAT CTGGTCCACC
GACTGGTGGC TCAACCCGGA AGGCGAGATT GAAAAAATCA GCCAGCGGCT GAAGGCCATC
GTGGTCATGC CGGACGACGC GCAGGCGGCC AGCGCGGTGC AGGTTCCTGC GGCGCTTCAG
GCTGATCCTG AGCCGGCCCC TGAAAGCGAG GCAGCGCAGG GTTTACCGAT GGAGCCGGAC
GGCTTTCCCG GCGAAGAAGA GATCCTGGCC ATCTACCGCC CGGCCAGCCT GCCCGCAGGC
GATCCGCTGA TGTTTCATGA CGCCAGCGCC TTGCCGGACC TGGAGGAGCA CCTCGCCCAC
GTCATTGAAG CCGAGGGTCC GCTCACCGAA ACGGCCTTGT TTCGAAAGGT CGCCCATGCC
TGGGGAATCG GGCGCATTGG CGCCAAGGTA TCCGAGCGGC TCAGAACGCT GACGCCCGAG
CGCTTCGTTC GCACCATCGA GGAAGAGGCG ATTTTTTACT GGCCGGCGCA ATCCGATACC
GCTTCATGGG AACAGTTTCG CATCGCCGAC GCCAGCGAGC CGTCGCGCCG CCATGTTGAC
GAGGTCTGCC TTGAAGAGCT TGCCGCGCTG GCCCACCACG TGTTGCAGCA AGCCGGCACG
TCGTCCCGGC AGGACGCTGC GCGCTCGGTC TGCCTGCTGC TGGGCATGAG CCGCGTCCCC
GAAGAGGCCG AAGCGCGGGC CAACGAGGCC ATGAACCGCC TGATCGCCTC GGAACTCGTC
GTGGACATCG AGGGCCAGGT GCGCTTGGTA GAGTGA
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| Protein sequence | MSYLQNDPLA MNGAMADDPA AAPEAQIRID IEADATTGYA AIQNAVPVVR ALRLTNLMAE
TVENLEVVVS CSPAFARGLK LRFDKLAAGE TRRISPLDLQ PDHAFLADLK ESVNASIRVV
AEAGGQELAS ATQPVQVLAY DQWAGTRALP ELLAAFCMPN NPAVDVLIGK ASRLLRASHP
ELSMNGYQSK NRDVVWKQVS SIYSTIAAEN LQYVEPPASF GADGQKIRMP DRILDARVAT
CLDLAMLFAS CLEQAGLRPV ILLKEGHAWV GVWLHLASFS DALIDDVQAI RKRVDSGEFL
VFETTGAARH ASSRPSLRIA MEQGHAHLLE DASFRYAIDI HRAREVQIKP LPSRALPLIP
GELAPEDAPA AIEPMPLLPP LDSDSLAPLD VRADDTPEGR LSTWKSRLLD LTLRNRLLNF
KPTKATLQLV APELARLEDA LADGAEFKIR PLPDLMEGAD PRMAELHTQR AGSTPLDDMA
LEALGNRELL ARASKDALDG NLLAIYSAAR TGLEEGGANT LYLALGLLRW TEAEKADAVH
LAPLLLIPVT LQRQSVRSGF RLIRHDDEAI VNPTLLHLLK TSFELKVAGL DVVPTDDKGV
DVARVLQSFR LAVREIAQWE VLEQAHLGIF SFTKYLMWKD LQDRTEQLKQ SRVVRHLIDK
PGEAFAREGT DGEFDRLDIT HRPQDILTPL LSDSSQLKAI CAVDAGRDLV LEGPPGTGKS
QTITNLIAHS LAKGKTVLFV SEKMAALEVV HRRLSSIGLG PFCLELHSSK AKKTDVLQQL
GKSLAISAQR TADDWAREAG RLGQMRQSLN GLVDSLHHEY PNGFTVFEAT GTCIAHTGKE
ASAMPWLDPL THDRADLDRL EETARRMASL AGALPTLENH PLSLIGQTDW SNSWQDELLG
AAKALEAAIR SLQEKSPALG SLTGQPTTGL SLDAYAALDQ LADVLLLAPG VPAGLAGQAH
DPGARARVHA LAQHGLARNQ HWQQIGPGWT EQVATLNAVE LQGQWAQASS DWWPKSMLAQ
RALIGRLSGF RTDSQRPGEA DVQALLAPLA ALNEEDRVLR SLQADAEALL QESYAGLKTD
WASLAAHELW AKKFADAVTR VAGADLAQVN PLHQALAPLV SSNRAALAAG GQAGRALLAY
RDAWREFSQK FDALETLAQP VDPLQGPDGA QGALERIQGV LSAWQLNRRL IQPWCLWRNV
REQAMDQGLQ ALVASLENGE VPLGEVESHF KFSYRNWWLK KTIDRDPLLR GFSSADHARK
IHEFRDADVR FQKLTEDYIV ATLSGHIPSL AGSAVGPDSE LGRLRRELQK KSRQMPVRQL
VRGLPTLLPK LKPCLLMSPL SVAQYLDAGY APFDLVVFDE ASQIPVWDAI GAIARGRQLV
VVGDAKQLPP TSFFSKSGDP EGGAHGMGEE PVEDLESILD ECLGAGMNRL SLQWHYRSRH
ESLITFSNVN YYDSSLITFP SPVTDDSAVR FEHVAGVYDR GGSRTNRLEA DAIVEGIAEH
YLSPHKKHLT LGVVTFNQPQ QLLIETLVDA RRRASPELDR AIAARANEPL FIKNLENVQG
DERDVIFFSI TYGPDAAGKT TMNFGPLNGE GGQRRLNVAI SRAREAVVIY STLRPEQIDL
ARVRAAGVRD LKHYLEFAIK GYRALAEQSL PTGQEPDSPF EVAVIRLLRK HGWEVHPQVG
CSGYRLDIGV VDPRAPGRYL AGIECDGATY HSAATARDRD RLRQHVLEGL GWHILRIWST
DWWLNPEGEI EKISQRLKAI VVMPDDAQAA SAVQVPAALQ ADPEPAPESE AAQGLPMEPD
GFPGEEEILA IYRPASLPAG DPLMFHDASA LPDLEEHLAH VIEAEGPLTE TALFRKVAHA
WGIGRIGAKV SERLRTLTPE RFVRTIEEEA IFYWPAQSDT ASWEQFRIAD ASEPSRRHVD
EVCLEELAAL AHHVLQQAGT SSRQDAARSV CLLLGMSRVP EEAEARANEA MNRLIASELV
VDIEGQVRLV E
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