Gene Pnap_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1206 
Symbol 
ID4689063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1288689 
End bp1290245 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content62% 
IMG OID639834209 
Producthypothetical protein 
Protein accessionYP_981442 
Protein GI121604113 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.230797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAAG TATTTACTGA TTCCAAACCT AGACGGAAAT TTAAGCTTAT GAGCCGACCG 
ATGTTTGACG AGATGAATGC CAGCACTGAA AGCGTGCGCA AACACTACCA GGGCTACCAG
CGCTGGCTGG CCCAGCAGCC GGCCGATGTG ATGCAGGCGC GCCGCGCCGA AGCGGAAATG
ATCTTTCGCC GGGTGGGCAT CACCTTTGCC GTTTATGGCG ACAAGGACGA AGACGGCTCG
GGCGCCGAGC GGCTGATTCC GTTTGACCTG ATTCCCCGCA TCATTCCGGC GCACGAATGG
GCGTCGATGG AAAAAGGCCT GGTCCAGCGG GTCACCGCGC TGAACCGCTT CATCCACGAT
GTGTACCACG AGCAGGAGAT CATCAAGGCG GGCATCATCC CGTCGGAGCA GATCTTCCAG
AACGCGCAGT TCCGTCCCGA GATGATCGGC GTGAAAGTGC CGGGAAACAT TTATTCGCAC
ATCAGCGGCA TCGACATCGT GCGCGCGCCC AACGCGCAAG GCGAGGGCGA GTACTACGTG
CTCGAAGACA ACCTGCGCGT GCCCAGCGGC GTGAGCTACA TGCTCGAAGA CCGCAAGATG
ATGATGCGGC TGTTCCCCGA GCTGTTCAGC CAGAACCGCG TCGCCCCGGT CGAGCATTAC
CCCGACCTGC TGCTCGAAAC CCTGCGCGCC ATGGCGCCGC CGGCCACCGC CGAGCCCACC
GTGGTGGTGC TGACGCCCGG CATGCACAAC TCGGCTTATT TCGAGCATGC CTTTCTGGCC
CAGCAAATGG GCGTCGAGCT GGTCGAGGGC CTGGACCTGT TCGTCAAGGA CAATTTTGTG
TACATGCGCA CCACGCGCGG CCCCAGGCGC GTCGATGTGA TCTACCGCCG CGTCGATGAC
GATTTCCTTG ATCCGCTGGC GTTCCGGCCC AATTCAACGC TGGGCTGCGC GGGCCTGCTC
AATGTGTACC GCAGCGGCAA CGTGGCCATC TGCAACGCCA TCGGCACCGG CGTGGCCGAC
GACAAGTCGA TTTACCCTTA CGTGCCCAAG ATGATCGAGT TCTACCTCGG CGAAAAACCG
ATCCTCAAGA ACGTGCCGAC CTACATGTGC CGCAACCCCG ACGACCTGAA GTACACGCTG
GCCAACCTGA AAGACCTGGT CGTCAAGGAA GTGCATGGCG CCGGCGGCTA CGGCATGCTG
GTCGGGCCGG CCTCGACCAA GGCCGAAATC GAAGACTTCC GCGCCGCGCT GCTGGCCAAT
CCGTCGGGCT ACATCGCCCA GCCCACGCTG AGCCTCTCGA CCTGCCCGAC CTATGTCGAA
AGCGGCATTG CCCCGCGCCA CATCGACCTG CGACCCTTCG TGCTGAGCGG CAAGGACGTG
CAGATGGTGC CCGGCGGCCT GACGCGCGTG GCGCTGAAGG ACGGCTCGCT GGTCGTCAAT
TCGTCGCAGG GCGGCGGCAC CAAGGACACC TGGATTCTGG AATCGGATTC GGCGCCTTCC
ATCCCCTCGG CGACCCAGTC GCAATCGCAG TCGCAATCCA TCGCCGTAGG AGTCTGA
 
Protein sequence
MVEVFTDSKP RRKFKLMSRP MFDEMNASTE SVRKHYQGYQ RWLAQQPADV MQARRAEAEM 
IFRRVGITFA VYGDKDEDGS GAERLIPFDL IPRIIPAHEW ASMEKGLVQR VTALNRFIHD
VYHEQEIIKA GIIPSEQIFQ NAQFRPEMIG VKVPGNIYSH ISGIDIVRAP NAQGEGEYYV
LEDNLRVPSG VSYMLEDRKM MMRLFPELFS QNRVAPVEHY PDLLLETLRA MAPPATAEPT
VVVLTPGMHN SAYFEHAFLA QQMGVELVEG LDLFVKDNFV YMRTTRGPRR VDVIYRRVDD
DFLDPLAFRP NSTLGCAGLL NVYRSGNVAI CNAIGTGVAD DKSIYPYVPK MIEFYLGEKP
ILKNVPTYMC RNPDDLKYTL ANLKDLVVKE VHGAGGYGML VGPASTKAEI EDFRAALLAN
PSGYIAQPTL SLSTCPTYVE SGIAPRHIDL RPFVLSGKDV QMVPGGLTRV ALKDGSLVVN
SSQGGGTKDT WILESDSAPS IPSATQSQSQ SQSIAVGV