| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1201 |
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| Symbol | |
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| ID | 4689326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1277729 |
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| End bp | 1280083 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834204 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_981437 |
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| Protein GI | 121604108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.955209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTAT TCACACCCGC TGTCGAAGCC GACATTCCGG AACCCGCCGA CCAGGACAGT
CTGGCGGCCT ACGCCCAGCG CGCCTACCTT GAATACGCGC TGAGCGTCGT CAAGGGCCGG
GCGCTGCCCG ATGTCTGCGA CGGCCAGAAG CCCGTCCAGC GGCGCATTCT CTACAGCATG
GCGCGCATGG GTCTGGCCTT TGGCGGCCCC AATGGCGCGA CCGGCGCCCG GCCGGTCAAA
TGCGCCCGCG TGGTCGGCGA TGTGCTCGGC CGCTTTCACC CGCACGGCGA CCAGGCCGCG
TATGACGCGC TGGTGCGCAT GGCGCAGGAC TTCTCGCAGC GCTACCCGCT GATCGACGGC
CAGGGCAATT TCGGCTCCAG AGACGGCGAT GGCGCCGCCG CCATGCGCTA CACCGAGGCC
CGGCTGGCAC GCATCACCAC GCTGCTGATG GACGAGATCG ACGAAGGCAC GGTCGATTTC
ATCCCGAATT ACGACGGCTC GACCGAGGAG CCGCGCCAGT TGCCCGCGCG CCTGCCGTTC
ACGCTGCTCA ACGGCGCCAG CGGCATTGCC GTCGGGCTGG CGACCGAAAT TCCCAGCCAC
AACCTGCGCG AGGTCGCCGA TGCCTGCGTG GCGCTGATCA AGACGCCCAA GCTCAGCGAT
GAAGAGTTGT ACACGCTGAT TGCCGGCCCC GACTACCCGG GCGGCGGCCA GATCATCTCC
AGCGGCGCCG AGATTGCCGC CGCCTACCGC ACCGGACGCG GCTCGCTCAA GGTGCGCGCG
CGCTGGAAGA TTGAAGAGCT GGCGCGCGGC CAGTGGCAGC TCGTCGTGCA GGAACTGCCG
CCCGGCGTCA GCACCCAGCG CGTGCTGGAG GAAATCGAGG AAATCACCAA CCCCAAGATC
AAGCTCGGCA AGAAGGCGCT CAGCCTGGAC CAGGTGCAGC TCAAGCAGTC CATGCTGGCG
GTGCTTGACG TGGTGCGCGA CGAGTCGAGC AAGGACGCCG CCGTGCGCCT GGTGTTCGAG
CCCAAGACCA GCCGGACGGC CCAGGCCGAA CTCATCAACA CGCTGCTGTC GCACACCAGC
CTGGAGAGTT CCTCGCCGAT CAACATGACC ATGATCGGCC TGGATGGCCG GCCGACGCAA
AAGTCATTGC GCCAGATGCT GAACGAATGG ATCGCGTTTC GCCAGACGAC GATTGAAAAA
CGCTCGCAGC ACCGGCTCGA CAAGGTGCTG GCGCGCATCC ACATCCTCGA AGGGCGGCAG
ACGGTGCTGC TCAACATCGA CGAGGTGATC GCCATCATCC GCCAGTCGGA CGAGCCCAAG
TCGGCGCTGA TCGCCAGGTT CTCCTTAAGC GACCGGCAGG CCGAGGACAT CCTGGAAATC
CGCCTGCGCC AACTCGCGCG GCTCGAAGCC ATCAAGATCG AGCAGGAACT GAAAACCCTG
CGCGAGGAGC AGGGCAGGCT CGAAGACATC CTGGGCAACC CGACGGCGCT GCGCCGGCTG
ATGATCAAGG AAATCGAGGC CGACGCCAAG CAGTTCGCCG ACCCGCGCCG CACGCTGATC
CAGGCCGAGA AAAAATCGGT GCTCGAAGTC AAGGTGCTCG ACGAGCCGGT CACGGTCGTG
GTCAGCAGCA AGGGCTGGGT GCGCGCGCGC GGCGGCCACG GCCATGCACC AAGCAGCTTT
GCCTTCAAGG CGGGCGACGC GCTGTACGGC ACGTTTGAAT GCCGCACCGT CGATACGCTG
CTGGCCTTTG GCAGCAACGG CCGGCTGTAT TCGGTGCCGG TGGCCATGCT GCCCGGCGCG
CGCGGCGACG GCCAGCCGGT CACAACGCTG ATCGACCTGG AATCGGGAAC GCAGCTGCTG
CACTACTTTG CCGGGCCGGC CTCGGCCATG CTGCTGCTGT CGAGTTCAGG CGGCTATGGT
TTCCTGGCGA CGGTGGAAAA CATGGTTTCG CGCAACCGCA GCGGCAAGGC CTTCATCACG
CTGGCCGAGG GCGAAACGCT GTGCCGCCCG TCCCATGTCA GCGGCGCCTC GGGCAGCCAG
CCCTTGCCGC CCGCCACGCA TGTGGCCTGC GCCTCGACCG GCCAGCGCAT CCTGACGTTT
GACATCGGCG AGATCAAGCA GATGGAAAAG GGCGGGCGCG GCCTGATGCT GATCGACCTG
GAAGACAAGG ACACACTGGC CGGCGCGGCC GCCTACACCC GCAGCGTGCG CATCGAAGGC
ATCGGGCGCG GCGCCAAGCC GCGCGAGGAA ACGCTGGAAA TCCGCAGCCT GAACAACGCG
CGCACCGTAC GCGCCCGCAA GGGCAAGTCG GCCGATCTGG GCTTCAAGCC GACCGGAATT
GTCCGGGTTG AGTGA
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| Protein sequence | MDLFTPAVEA DIPEPADQDS LAAYAQRAYL EYALSVVKGR ALPDVCDGQK PVQRRILYSM
ARMGLAFGGP NGATGARPVK CARVVGDVLG RFHPHGDQAA YDALVRMAQD FSQRYPLIDG
QGNFGSRDGD GAAAMRYTEA RLARITTLLM DEIDEGTVDF IPNYDGSTEE PRQLPARLPF
TLLNGASGIA VGLATEIPSH NLREVADACV ALIKTPKLSD EELYTLIAGP DYPGGGQIIS
SGAEIAAAYR TGRGSLKVRA RWKIEELARG QWQLVVQELP PGVSTQRVLE EIEEITNPKI
KLGKKALSLD QVQLKQSMLA VLDVVRDESS KDAAVRLVFE PKTSRTAQAE LINTLLSHTS
LESSSPINMT MIGLDGRPTQ KSLRQMLNEW IAFRQTTIEK RSQHRLDKVL ARIHILEGRQ
TVLLNIDEVI AIIRQSDEPK SALIARFSLS DRQAEDILEI RLRQLARLEA IKIEQELKTL
REEQGRLEDI LGNPTALRRL MIKEIEADAK QFADPRRTLI QAEKKSVLEV KVLDEPVTVV
VSSKGWVRAR GGHGHAPSSF AFKAGDALYG TFECRTVDTL LAFGSNGRLY SVPVAMLPGA
RGDGQPVTTL IDLESGTQLL HYFAGPASAM LLLSSSGGYG FLATVENMVS RNRSGKAFIT
LAEGETLCRP SHVSGASGSQ PLPPATHVAC ASTGQRILTF DIGEIKQMEK GGRGLMLIDL
EDKDTLAGAA AYTRSVRIEG IGRGAKPREE TLEIRSLNNA RTVRARKGKS ADLGFKPTGI
VRVE
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