| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1200 |
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| Symbol | |
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| ID | 4689920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1276743 |
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| End bp | 1277582 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834203 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_981436 |
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| Protein GI | 121604107 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA AGCTGTTTTC GTTGCTGAAC CTGCCGCTGC TGGCCGTGCT GCTGACGGCC
CTGCATGCCC CCCCGGCGCG GGCTGACATC TGGGCGTATA TCGATGGCCA GGGCGTCACG
CACTTTTCAT CGCTGCAGCT CGATGAGCGC TACGAGCTTT TTTCACGCGG TGGCGAAAGC
TTCACGACGG GAAAAACCGC TGGCAACCCG GCCCAGGGCG CCCAAGGCGT TGCCGCGACG
CCGCCCAGGC TGCGGGCGTA TTTCGAGCTG TCTCCCGGCT ACAAGGCGGT CAGGCATCTG
CTGCGCGAAG CCTCGGACAA GCACGGCATT GATTACGAAC TGCTGCAGGC GCTGATTGCC
ACCGAGTCCG GCTTCAACGC CCAGGCGGTT TCCCCCAAGG GCGCGGTCGG CCTGATGCAG
CTGATTCCAC CGACGGCGGC GCGCTACGGC GTGAAATCCG ACAAAACCGC CCAGGCCGAG
CAAAAGCTGA CCGATCCCAG GACCAACATC CGGGCCGGCT CCAGCTACCT GAGCGACCTG
ATGAAGCTCT TCCCGGGTGA GATTGAACTG GCCATCGCGG CCTACAACGC GGGCGAAGGC
GCGGTCCAGC GGGCGGGCAA CCGGATACCG AATTACCCGG AAACGAAAAA TTACGTCAAA
ACCGTGATGC AGCTCTACAA CCAGCTCAAG CCGGCCAGCA CGGGACGCAG CACTTCAGTC
AGTTCGGGCC GGGTGCGCAT GGAAATGATG GGCGGCGCCA GCGGCCGGGC CAACATGCCT
GCGGCCCTGG CCGCGTCGCC GTCCCTTGTA TTGCCGGAGG TCGCAGCCCG GCTGGATTGA
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| Protein sequence | MRLKLFSLLN LPLLAVLLTA LHAPPARADI WAYIDGQGVT HFSSLQLDER YELFSRGGES
FTTGKTAGNP AQGAQGVAAT PPRLRAYFEL SPGYKAVRHL LREASDKHGI DYELLQALIA
TESGFNAQAV SPKGAVGLMQ LIPPTAARYG VKSDKTAQAE QKLTDPRTNI RAGSSYLSDL
MKLFPGEIEL AIAAYNAGEG AVQRAGNRIP NYPETKNYVK TVMQLYNQLK PASTGRSTSV
SSGRVRMEMM GGASGRANMP AALAASPSLV LPEVAARLD
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