| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1199 |
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| Symbol | |
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| ID | 4689927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1274752 |
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| End bp | 1276731 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834202 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_981435 |
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| Protein GI | 121604106 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AAAACATCAC TGCTTCCCCC GCTTATTCCG AAAGCTCGAT CCGCGTTTTG
AAGGGCCTGG AGCCCGTCAA GCAGCGCCCG GGCATGTACA CCCGCACCGA CAATCCGCTG
CACATCATTC AGGAAGTGCT CGACAACTCG GCCGACGAAG CGCTCGCCGG GCACGGCAAA
AAGATCAAGG TCACGCTGCA CACCGATGGC TCAGTCAGCA TTGAAGACGA CGGGCGCGGC
ATTCCGTTCG GCCTGCACCC GGAAGAAAAA GCGCCCGTGG TCGAGCTGGT GTTCACCCGG
CTGCATGCCG GCGGCAAGTT CGACAAGGGC AAGGGCGGCG CCTACAGTTT TTCGGGCGGC
CTGCACGGCG TCGGCGTCAG CGTGACCAAT GCGCTATCCA CCCGGCTTGA AGTCACTTCC
TACCGCGAAG GCAAGGTCGC CAGCCTGGCT TTTTCCGGCG GCGACGTGAT CGAGCCGCTG
GTGCTGCGCC CGAACGGCAA TGGCGACCGA AAATCCGGCA CCACGGTGCG CGCCTGGCCC
GATGCCAAAT ATTTTGAATC ACCGGCGCTG CCGATGGCCG AGCTGACGCA CCTGCTGCGC
AGCAAGGCGG TGCTGATGCC CGGCGTGACC GTCACGCTGA CGAATGAAAA AACCAAGGAA
GTCCAGACCT GGCTCTACAA GGGCGGCCTG CGCGACTACC TGATGCAGAC GCTGACCGCC
GACCCGGTGA TCCCGATGTT TGAAGAGGAG GGCTTTGCCG ATGCCGCGCA CGAGACCTTC
GCCGAAGGCG AGGGTGCCAG CTGGTGCGTC GCCTTCACCG AAGACGGCCA GCCGGTGCGC
GAAAGCTACG TCAACCTGAT CCCGACCAGC GCCGGCGGCA CGCACGAAAG CGGGCTGCGC
GACGGCCTGT TCACGGCGGT GAAAAGCTTT ATCGAACTGC ATTCGCTGCT GCCCAAGGGC
GTCAAGCTGC TGCCCGAGGA TGTGTTTGCC CGCGCCAGCT ACGTGCTCTC GGCCAAGGTG
CTGGACCCGC AGTTCCAGGG CCAGATCAAG GAGCGGCTCA ATTCGCGCGA TGCGGTGCGG
CTGGTGTCGA GTTTTGTGCG CCCGGCGCTC GAACTCTGGC TGAACCAGCA TGTCGATTAC
GGCAAGAAAC TGGCCGAACT CGCCATCAAG GCCGCGCAAA GCCGCCAGAA GGCCGGCCAG
AAGGTCGAAA AACGCAAGGG CTCGGGCGTG GCGGTGCTGC CCGGCAAGCT GACCGATTGC
GAAAGCAAGG ACCTGGCGAA CAACGAAGTG TTTCTGGTCG AGGGCGACTC GGCCGGCGGC
AGTGCCAAGA TGGGCCGCGA CAAGGAAAAC CAGGCCGTGC TGCCGCTGCG TGGCAAGGTG
CTCAACACCT GGGAAGTGGA CCGCGACCGG CTGTTCGCCA ACACCGAAAT CCACGATATC
TCGGTCGCCA TCGGCGTCGA TCCGCACGGC CCGAACGACA CGCCGGACCT GAGCGCCCTG
CGCTACGGCA AGGTCTGCAT CCTGTCCGAC GCCGACGTGG ACGGCTCGCA TATCCAGGTG
CTGCTGCTGA CGCTGTTTTT CCGGCATTTC CCCAAGCTCA TCGAAACCGG CCATGTCTAT
GTGGCGCGGC CGCCGCTGTA CCGCGTCGAT GCGCCGGCGC GCGGCAAGAA GCCGGCGTCC
AAGGTCTATG CCCTGGACGA AGGCGAACTG ACCGCCATCC TGGACAAATT GCGCAAGGAC
GGCGTGCGCG AAAACGCCTG GAGCATCAGC CGCTTCAAGG GCCTGGGCGA AATGAGCGCG
GAACAATTGT GGGATACGAC ACTCAATCCG GACACCCGCC GCCTGATGCC GGTTCAGTTG
GGCAACCAGG ATTTCGGGCA GACCGAAAGC CTCATCACCA AGCTGATGGG CAAGGGCGAG
GCGGCGGCGC GGCGTGAACT GATGGAACTG CACGGCGACG CGGTGGAAAT TGACGTTTGA
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| Protein sequence | MAEKNITASP AYSESSIRVL KGLEPVKQRP GMYTRTDNPL HIIQEVLDNS ADEALAGHGK
KIKVTLHTDG SVSIEDDGRG IPFGLHPEEK APVVELVFTR LHAGGKFDKG KGGAYSFSGG
LHGVGVSVTN ALSTRLEVTS YREGKVASLA FSGGDVIEPL VLRPNGNGDR KSGTTVRAWP
DAKYFESPAL PMAELTHLLR SKAVLMPGVT VTLTNEKTKE VQTWLYKGGL RDYLMQTLTA
DPVIPMFEEE GFADAAHETF AEGEGASWCV AFTEDGQPVR ESYVNLIPTS AGGTHESGLR
DGLFTAVKSF IELHSLLPKG VKLLPEDVFA RASYVLSAKV LDPQFQGQIK ERLNSRDAVR
LVSSFVRPAL ELWLNQHVDY GKKLAELAIK AAQSRQKAGQ KVEKRKGSGV AVLPGKLTDC
ESKDLANNEV FLVEGDSAGG SAKMGRDKEN QAVLPLRGKV LNTWEVDRDR LFANTEIHDI
SVAIGVDPHG PNDTPDLSAL RYGKVCILSD ADVDGSHIQV LLLTLFFRHF PKLIETGHVY
VARPPLYRVD APARGKKPAS KVYALDEGEL TAILDKLRKD GVRENAWSIS RFKGLGEMSA
EQLWDTTLNP DTRRLMPVQL GNQDFGQTES LITKLMGKGE AAARRELMEL HGDAVEIDV
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