| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1198 |
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| Symbol | |
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| ID | 4689880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1273356 |
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| End bp | 1274597 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834201 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_981434 |
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| Protein GI | 121604105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.852259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCAA GCCCCCTTTC TTCGCCCCCA AAACTCTCCA TGCTCCAGGT GCTGGCCTGC
GGCGCGGCCA TTGTCACGCT GTCGATGGGC ATCCGGCACG GCTTTGGCCT GTGGCTGCAG
CCCATCACGC AGGCGCAGGG CTGGACGCGT GAAACCTTCG CCTTTGCGAT TGCGGTGCAA
AACCTGTCGT GGGGCATCTT CGGGATTTTC GCCGGCATGG TGGCTGACCG CTTCGGCGCG
TTCCGGGTGA TTGCGGGCGG CGCCGTGCTG TACGCGCTGG GCCTGGTGGG CATGGCGCTG
TCGCCGACCG GCCTGCTGTT CACGCTGACG GCCGGGGTGC TGATCGGGGC CGCGCAGGCA
GGCACCACCT ACGCGGTGAT CTACGGCGTC ATCGGCCGCA ATATTTCGGC CGACAAGCGC
TCGTGGGCGA TGGGAGTCGC CGCTGCGGCG GGCTCGTTCG GCCAGTTCCT GATGGTGCCT
ACCGAAGGCT TCCTGATCAG CAGCCTGGGC TGGCAGGCCG CCCTCCTGGT GCTCGGCGGC
GCCGTGCTGC TGATCGTGCC GATGGCGCTG GGCTTGCGCG AAACCGGCTT TGCCGGCGCA
ACGCCCGCCA AGCGCGACCA GAGCATAGCC CAGGCGCTGC GCGAGGCGCT CAAATACCCG
AGCTTTCAGA TGCTGATGGC GGGCTACTTC GTCTGCGGCT TTCAGGTCGT GTTCATCGGC
GTGCACATGC CCAGCTACCT CAAGGACAAG GGCCTGTCGC CGCAGGTGGC AGGCTATGCG
CTGGCGCTGA TCGGGCTGTT CAATGTCTTC GGCACCTACA TTGCCGGCTC GCTGGGCCAG
CGCATCGCAA AACGCAAAAT CCTGGCGACG ATTTACTTTT CCCGCGCCGT CGTCATCGCC
GTGTTTCTGG CCGCGCCGCT GAGCCCGGCC AGCGTCTATG TTTTCGCCAG CCTGATGGGG
CTGCTGTGGC TCTCGACGAT TCCGCCGACC AACGCGGTGG TGGCGCAGAT CTTCGGCATC
CAGCACATGT CGATGCTCAG CGGCTTCATC TTCTTCAGCC ACCAGATCGG CTCGTTCATG
GGCGTGTGGC TGGGCGGCGT GCTGTACGAC CGCACCGGCA GCTACGACAT CGTCTGGTAC
ATCGCGATTG CGCTGGGCGT GTTCGCGGGA CTGGTGAACC TGCCGGTCCG GGAAGCGCCA
ATCGAGCGCA GCAGCCCGGG CGGATTGCCG CAGGGAGCCT GA
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| Protein sequence | MASSPLSSPP KLSMLQVLAC GAAIVTLSMG IRHGFGLWLQ PITQAQGWTR ETFAFAIAVQ
NLSWGIFGIF AGMVADRFGA FRVIAGGAVL YALGLVGMAL SPTGLLFTLT AGVLIGAAQA
GTTYAVIYGV IGRNISADKR SWAMGVAAAA GSFGQFLMVP TEGFLISSLG WQAALLVLGG
AVLLIVPMAL GLRETGFAGA TPAKRDQSIA QALREALKYP SFQMLMAGYF VCGFQVVFIG
VHMPSYLKDK GLSPQVAGYA LALIGLFNVF GTYIAGSLGQ RIAKRKILAT IYFSRAVVIA
VFLAAPLSPA SVYVFASLMG LLWLSTIPPT NAVVAQIFGI QHMSMLSGFI FFSHQIGSFM
GVWLGGVLYD RTGSYDIVWY IAIALGVFAG LVNLPVREAP IERSSPGGLP QGA
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