| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1194 |
|---|
| Symbol | |
|---|
| ID | 4689333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1269563 |
|---|
| End bp | 1270336 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639834197 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_981430 |
|---|
| Protein GI | 121604101 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.972914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.598538 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGAGAT TCAAAAGCCT GGGCAGCGGC AGCGGGGGCA ACTCAACACT GGTTGAAGCT
TGCGGCCTGG TGCCCTTTCG CATACTGATT GACTGCGGGC TGGGCATTCG GCAACTCGTA
CTTCGCCTGG CGGAAGTCGA TCTGCGGCCT GAAGACATTC ATGCGGTCTT CATTACCCAT
GAACATGGCG ACCACATCGG CTGTGCGCTG ACGCTGGCGC TGCGCCACCG GATTCCGGTC
TGGATGAGCC AGGGAACCCA TTCGGCCATA GGCGCGCCTG ATTTCGAAGG TTTGCTGCAT
ACCGCGCGGG ACGAAAAGGC GATTGACCTG GGCGGCCTGC AACTGATGCC GTTTACCGTT
CCCCACGACG CGCGGGAACC GCTGCAGCTC AGCTGCACCG ATGGCTCGGC AAAACTGGGC
ATCCTGACCG ATCTGGGCCA TGCAACGCCG CATGTGATGG CGCATCTGCA GGCTTGCGAC
GCCTTGCTGC TGGAGTCCAA CCACGACACC GAGCTGCTGA GCCAATCGGT TTATCCAGCC
TTTTTAAAGC GTCGCGTGGG GGGTGATTAT GGACATTTGT CCAATGCCGC AGCCGCTGGC
ATTGCCTGCG CCGCAAACCA CAGCGGCCTC AAGCATGTGG TCGCCGCTCA CTTGAGCGCG
CAAAACAACC GGCCCGATCT GGCGCAGGAT GCGCTGTCCA ATGCTTTGGG ATGCCACCGC
AGCGATATCG TGGTGGCGGG TGCGGCCAGC GGCACACCGT GGCTGCAAAT TTGA
|
|---|
| Protein sequence | MLRFKSLGSG SGGNSTLVEA CGLVPFRILI DCGLGIRQLV LRLAEVDLRP EDIHAVFITH
EHGDHIGCAL TLALRHRIPV WMSQGTHSAI GAPDFEGLLH TARDEKAIDL GGLQLMPFTV
PHDAREPLQL SCTDGSAKLG ILTDLGHATP HVMAHLQACD ALLLESNHDT ELLSQSVYPA
FLKRRVGGDY GHLSNAAAAG IACAANHSGL KHVVAAHLSA QNNRPDLAQD ALSNALGCHR
SDIVVAGAAS GTPWLQI
|
|---|
| |