Gene Pnap_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1178 
Symbol 
ID4689826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1255333 
End bp1255857 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID639834182 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_981415 
Protein GI121604086 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.928764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTT ACCAGCTGGA CGATTTGCAT CCTGTCATTC ACGACTCGGC CTGGGTGGCC 
GACAGCGCGC AGGTCATCGG CAATGTGACG CTGGCCGAAG GCAGCAGCGT CTGGTTTGGC
GTGGTGGCCC GGGGCGATAC CGACACCATC ACGGTGGGCA AGGGCTCCAA CATCCAGGAC
AACAGCGTGC TGCACGCCGA TGAGGGCATG CCGCTGGTGA TTGGCGACAA CGTGACCGTC
GGCCACCAGG TCATGCTGCA CGGCTGCACG ATTGGCGACG GCTCGTTGAT CGGCATCCAG
TCGGTGGTGC TCAATGGCGC GAAGATCGGC AAGCATTGCC TGGTCGGCGC CGGCTCGCTG
GTGACCGAGG GCAAGGAGTT TCCCGACGGC TGCATGATCC TGGGCAGCCC GGCCAAGGCC
GTGCGCCAGT TGTCTGACGC GCAGATCGAG GGTTTAAAAA TGAGCGCGCA GCACTATATG
GACAATGCCC GGCGCTACAA AGCCGGGCTC AGGAAGCTGG GCTGA
 
Protein sequence
MAIYQLDDLH PVIHDSAWVA DSAQVIGNVT LAEGSSVWFG VVARGDTDTI TVGKGSNIQD 
NSVLHADEGM PLVIGDNVTV GHQVMLHGCT IGDGSLIGIQ SVVLNGAKIG KHCLVGAGSL
VTEGKEFPDG CMILGSPAKA VRQLSDAQIE GLKMSAQHYM DNARRYKAGL RKLG