Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1144 |
Symbol | |
ID | 4688773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1215758 |
End bp | 1216528 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639834148 |
Product | ABC transporter related |
Protein accession | YP_981381 |
Protein GI | 121604052 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAACCC CGGAGGCGAT GGTGTCGCTG CGCAACCTGA CGGTCAGCTA CCGCCAGCAT CCGGCGCTGC ACCACATCAG CGGCAGCTTC GCGCCCGGCT CGCTGACCGC CGTGGTCGGG CCGAACGGCT CGGGCAAAAG CACCCTGCTC AAGAGCATCG TCGGCCTGCT GCCCATCGAA GGCGGCGCGC TGGCGGTAGC GCCACCACGC GAGCGCATCG CCTACCTGCC GCAAATGGCC GAGATCGACC GCGGCTTTCC CATTGACGTG CGCGACTGCG TGCTGCTGGG CTGCTGGGGT GCGGCCGGGG CCTGGGGTGC GGTGAACCGG GCCATGCTGA CGCGCGTCGA TGCCGCCCTG CAGGCCGTGG GACTCGAAGG ATTTGAGCGC CGCTCTATCG GCAGCCTGTC CAGCGGACAG CTGCAGCGGG TGATGTTTGC CCGCATGCTG GTGCAGGACG CCGAGCTGAT CCTGCTCGAC GAGCCGTTCA ACGCGGTCGA TGCCAGGACC ACCGCCGCCC TGCTGGGGCT GGTGCGGCAG TGGCACGGCC AGCGGCGCAC CGTGATTGCC GTGCTGCACG ACGATGCGAT GGTTCGCCAG CATTTTCCGC AAACCGTGCT GCTGGCGCGC GAACTGGTCG GCTGGGGCGC GACCGGCGAG GTGCTGACCG AGCCGAATCT GCGCCGCGCC CGCGCCATGG CCGAAGCCTG GGACGAGAAC GCCGAACTCT GTGGCACCGA CACGGCAGCC GCGCAGGAAG CGGCCGCATG A
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Protein sequence | MVTPEAMVSL RNLTVSYRQH PALHHISGSF APGSLTAVVG PNGSGKSTLL KSIVGLLPIE GGALAVAPPR ERIAYLPQMA EIDRGFPIDV RDCVLLGCWG AAGAWGAVNR AMLTRVDAAL QAVGLEGFER RSIGSLSSGQ LQRVMFARML VQDAELILLD EPFNAVDART TAALLGLVRQ WHGQRRTVIA VLHDDAMVRQ HFPQTVLLAR ELVGWGATGE VLTEPNLRRA RAMAEAWDEN AELCGTDTAA AQEAAA
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