Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1143 |
Symbol | |
ID | 4688801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1214877 |
End bp | 1215761 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639834147 |
Product | ABC-3 protein |
Protein accession | YP_981380 |
Protein GI | 121604051 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCCT TCGCCGCCTG GCTGTGGGAC GCGGCCTTTT CCCCGTTCGC CGAATTCGCC TTCATGCGCC GCGCGCTGGT CGCCACGCTG GCGCTGTCGC TCAGCGCCGC GCCGCTGGGC GTTTTTTTGA CGCTGCGGCG CATGAGTTTG CTGGGCGATG CGCTCAGTCA TGCGGTGCTG CCGGGCGTGG CGATTGGCTT CATGCTGGGC GGCCTGTCGC TGAGCGCGAT GGCGCTGGGC GGCGTGGTGG CGGGCATGGG GGTGGCGGCG CTGGCCGGGC TGGTCACGCG CTTCACCACG CTGAAAGAAG ACGCCAGCCT GGCGGCCATC TACCTGGTCG CGCTGGCGCT GGGCGTGACG CTGATCTCGG GCCACGGCAC CCAGCTCGAC CTGCTGCACA TTTTGTTCGG CAGCGCGCTG GGCGTGGACA CGCCGGGCCT CCTGATGGTG GCCAGCGTGG CCAGCGTCAG CGTGCTGCTG CTGGCCGCGA TGTACCGGGG GCTGGTGCTG GAGAGTTTTG ACCCGGTGTT CCTGGCGGCC GCCGGGCGGC GCGGCTGGCT CTGGCAGCAG GGCTTTTTGA TGCTGGTGGT CATCAACCTG GTGGCGGGCT TTCAGACGCT GGGCACCTTG ATGGCCGTCG GGCTGATGAT GCTGCCGGCC GTGTCGAGCC GGCTGTGGCA CGACACGCTG CCGGCGCAAC TGCTCAATGC CAGCGCGCAG GCCATGCTGG CCAGCGTGGC CGGGCTGCTG CTGTCGTATC ACCTGGACAC GCCCTCCGGC CCGACCATCA TCGGCTGCGC GGGGGCGCTT TACTTTGCGT CGCTGCTGGT CGCGCCAGGC GGCTGGCTGC CGCGCGTGCT GAGCCGGACG CACCGGGTCG CCTGA
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Protein sequence | MMAFAAWLWD AAFSPFAEFA FMRRALVATL ALSLSAAPLG VFLTLRRMSL LGDALSHAVL PGVAIGFMLG GLSLSAMALG GVVAGMGVAA LAGLVTRFTT LKEDASLAAI YLVALALGVT LISGHGTQLD LLHILFGSAL GVDTPGLLMV ASVASVSVLL LAAMYRGLVL ESFDPVFLAA AGRRGWLWQQ GFLMLVVINL VAGFQTLGTL MAVGLMMLPA VSSRLWHDTL PAQLLNASAQ AMLASVAGLL LSYHLDTPSG PTIIGCAGAL YFASLLVAPG GWLPRVLSRT HRVA
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