Gene Pnap_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1143 
Symbol 
ID4688801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1214877 
End bp1215761 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID639834147 
ProductABC-3 protein 
Protein accessionYP_981380 
Protein GI121604051 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCT TCGCCGCCTG GCTGTGGGAC GCGGCCTTTT CCCCGTTCGC CGAATTCGCC 
TTCATGCGCC GCGCGCTGGT CGCCACGCTG GCGCTGTCGC TCAGCGCCGC GCCGCTGGGC
GTTTTTTTGA CGCTGCGGCG CATGAGTTTG CTGGGCGATG CGCTCAGTCA TGCGGTGCTG
CCGGGCGTGG CGATTGGCTT CATGCTGGGC GGCCTGTCGC TGAGCGCGAT GGCGCTGGGC
GGCGTGGTGG CGGGCATGGG GGTGGCGGCG CTGGCCGGGC TGGTCACGCG CTTCACCACG
CTGAAAGAAG ACGCCAGCCT GGCGGCCATC TACCTGGTCG CGCTGGCGCT GGGCGTGACG
CTGATCTCGG GCCACGGCAC CCAGCTCGAC CTGCTGCACA TTTTGTTCGG CAGCGCGCTG
GGCGTGGACA CGCCGGGCCT CCTGATGGTG GCCAGCGTGG CCAGCGTCAG CGTGCTGCTG
CTGGCCGCGA TGTACCGGGG GCTGGTGCTG GAGAGTTTTG ACCCGGTGTT CCTGGCGGCC
GCCGGGCGGC GCGGCTGGCT CTGGCAGCAG GGCTTTTTGA TGCTGGTGGT CATCAACCTG
GTGGCGGGCT TTCAGACGCT GGGCACCTTG ATGGCCGTCG GGCTGATGAT GCTGCCGGCC
GTGTCGAGCC GGCTGTGGCA CGACACGCTG CCGGCGCAAC TGCTCAATGC CAGCGCGCAG
GCCATGCTGG CCAGCGTGGC CGGGCTGCTG CTGTCGTATC ACCTGGACAC GCCCTCCGGC
CCGACCATCA TCGGCTGCGC GGGGGCGCTT TACTTTGCGT CGCTGCTGGT CGCGCCAGGC
GGCTGGCTGC CGCGCGTGCT GAGCCGGACG CACCGGGTCG CCTGA
 
Protein sequence
MMAFAAWLWD AAFSPFAEFA FMRRALVATL ALSLSAAPLG VFLTLRRMSL LGDALSHAVL 
PGVAIGFMLG GLSLSAMALG GVVAGMGVAA LAGLVTRFTT LKEDASLAAI YLVALALGVT
LISGHGTQLD LLHILFGSAL GVDTPGLLMV ASVASVSVLL LAAMYRGLVL ESFDPVFLAA
AGRRGWLWQQ GFLMLVVINL VAGFQTLGTL MAVGLMMLPA VSSRLWHDTL PAQLLNASAQ
AMLASVAGLL LSYHLDTPSG PTIIGCAGAL YFASLLVAPG GWLPRVLSRT HRVA