| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1134 |
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| Symbol | |
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| ID | 4687366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1207438 |
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| End bp | 1208322 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834138 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_981371 |
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| Protein GI | 121604042 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCC GACACCTGCG CTACTTTCTG GTCCTGGCTG AAGAGCTGCA CTTTGGCCGG
GCCGCGCGCC GGCTGTCGAT GTCGCAGCCG CCGCTGTCGC TCAACATCCA GCAGCTGGAG
GCGTCGATTG GCGCGCGCCT GTTCACGCGC AGCAGCAAAT CCGTGGCGCT GACCGCCGCC
GGGCTGGCCT TCGTGCCGGC GGCGCGCGCG CTGCTCGACC AGGCTGCAGA GGCGGCCCGC
CATGCGCGCG ATGTGGGGCA GGGCATGGCG GGCAGCCTGA GCATCGGCTT TGCCGGCACC
ATGCTCTACA GCGGCCTGCC CGACATCCTG GAGCGTTTCC AGGCCCGGCA TCCCTTGCTG
CGGCTGATGC TGAAAGAACT GAGTTCGAGC GAGCAACTGA TCGAACTGGC GCATGACCGG
CTCGACATCG GCTTCGTCCA CACCACGCGC GTGCCGCCCG AGCTGTCGCA GATTCTCGTT
TCCAGCCAGG CGTTTGTCGG CTGCCTGCCC GCCGGCCATG CGCTGGCGCA GCAAAAATCG
CTGTCGCTGG GCGACTTGCA GGGCGAGCCG TTTGCCGTGG TGTCGCGCGC GGTGTCGCCT
GACTACCATG AGCGCATCCT GAGCATCTGC ATCGAAGCCG GCTTTTACCC CGAAATCCGC
TATGAATTGA GGCACTGGCT CAGCGTGGTG TCGCTGGTGT CGCAAGGCAT GGGCGTGGCC
CTGGTGCCGG CGGCGCTCGG CCGCTCGGCG ATGGCGGGCG CGGCGTTTGT GCCGCTGGAC
ATGGCGACCA CGCCCTACGA CACGCATTGC CTGTGGAAAA CCGCGCGTGA CAACCCGGCG
CTGGCGGGCT TTGTCGATGC CGTGCGGGCT GCAAATGCAC GGTGA
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| Protein sequence | MEFRHLRYFL VLAEELHFGR AARRLSMSQP PLSLNIQQLE ASIGARLFTR SSKSVALTAA
GLAFVPAARA LLDQAAEAAR HARDVGQGMA GSLSIGFAGT MLYSGLPDIL ERFQARHPLL
RLMLKELSSS EQLIELAHDR LDIGFVHTTR VPPELSQILV SSQAFVGCLP AGHALAQQKS
LSLGDLQGEP FAVVSRAVSP DYHERILSIC IEAGFYPEIR YELRHWLSVV SLVSQGMGVA
LVPAALGRSA MAGAAFVPLD MATTPYDTHC LWKTARDNPA LAGFVDAVRA ANAR
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