Gene Pnap_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1131 
Symbol 
ID4688130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1204180 
End bp1205178 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID639834135 
Productregulatory protein, LacI 
Protein accessionYP_981368 
Protein GI121604039 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC CCCAGGGTTT TACCGTTCAC GATATTGCCC GGCTGGCCGG CGTGTCGGCC 
ATGACCGTCT CGCGCACCCT GAACCATCCC GAAAAAGTCT CCCCCGCCGT GCTGGCCAGG
GTGCGCGAAG TCGTGGCCCG CACCGGCTTC GTGCCCAACG GCATGGCGCG CGGCCTGCGT
TCCTCCAAGG CCAGGCTGGT GGCGGCCGTG CTGCCCACGC TGGTCGGGCC GGTGTTCCAG
GAAACCGTTC GCGCGCTGAA CGAGGCACTG GACGAGCAGG GCTACCAGTT GATGATCGGC
CAGAGCGGCT ACGACGCATC GCGGGAAGAC GCGTTGTTAG ATGCCATCAT TCGCCGCCGG
CCCGATGGCA TCGTGCTGAC CGGCATCATG CATTCGCCCG AGGGCCGGCG CCAGCTCCTG
GCGTCCGGCA TTCCGGTCGT CGAAACCTGG GACTTGACGC CCACGCCGAT TGACATGCTG
GTCGGCTTTT CGCATGAGCG GATCGGCCAG TCGGTGTGCC ATTTCCTGTA CAGCCGGGGC
TATCGGCATC CGGCGCTGAT CAGCGCCGAT GACGACCGGG CGCGCCGCCG CATCGAAGGC
TTCCAGGGCA TGAGCCGCAC GCTGGGCCTG GACGCGGCGC CCACGCACCT GGTGCCAGCG
CCGACCACCC TCGGCTCGGG CCGCGCCGGG CTGGCCGCCG TTCTGGCTGC GCATCCGCAC
ACCGACGCGG TGTTCTGCAG CTCCGACATG CTGGCCCTGG GCGTGCTGAT CGAGGCGCAG
GCGCGGGGCC TGGCCGTCCC CAGGCAACTG GGGGTGGTGG GCCTGGGCGA CCTGGACCTG
GCCGCCAGCC TGCAACCCGC GCTGACCACC GTGCGCATCG ACGGCACACG CATTGGCCGC
ACCGCCGCGC AGTACATCGT GGAGCGGGCC GAAGGCCGAA GCGTCAGCGA GCCGATTGTC
GATATCGGCT TCGAGATCAT CGAGCGCGCC AGCGCCTGA
 
Protein sequence
MKKPQGFTVH DIARLAGVSA MTVSRTLNHP EKVSPAVLAR VREVVARTGF VPNGMARGLR 
SSKARLVAAV LPTLVGPVFQ ETVRALNEAL DEQGYQLMIG QSGYDASRED ALLDAIIRRR
PDGIVLTGIM HSPEGRRQLL ASGIPVVETW DLTPTPIDML VGFSHERIGQ SVCHFLYSRG
YRHPALISAD DDRARRRIEG FQGMSRTLGL DAAPTHLVPA PTTLGSGRAG LAAVLAAHPH
TDAVFCSSDM LALGVLIEAQ ARGLAVPRQL GVVGLGDLDL AASLQPALTT VRIDGTRIGR
TAAQYIVERA EGRSVSEPIV DIGFEIIERA SA