Gene Pnap_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1128 
Symbol 
ID4688005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1201054 
End bp1201743 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID639834132 
Productprotein-L-isoaspartate(D-aspartate) O-methyltransferase 
Protein accessionYP_981365 
Protein GI121604036 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACG AACAAGCCCG ATTCAACATG ATTGAGCAGC AAATCCGCCC CTGGGAAGTG 
CTGGACAACC AGGTCCTTTC CCTGCTCGCG GTGATGCGGC GCGAAGACTT CGTGCCGCCG
GCCTGCAAGG CGCTGGCCTT CACCGACATG GAAATCCCGC TGCCGCCGCA CAAAAACCCC
GGCCAGTGCA TGCTCGCGCC CCGCGTCGAA GCCCGCATCC TGCAAGACCT GGCCGTGCAA
AAGCATGAAA AAGTGCTGGA AATCGGCACC GGCTCCGGTT TCATGGCCGC CCTGCTCGCG
CACCGCGCCC AGCAGGTCAT CACCCTGGAA ATCGAGCCTG AACTGGCCGA AACCGCGCGC
CGCAACCTGC AAAAAGCCGG CATCTACAAC GCCGAAGTGC GCCAGGCCGA CGGCGCGGCC
AACCTGGCCG AAGCCGTGTC CGGCAACGGC CCGCTGCGCG GCCCTTTCGA CGTGATCGTG
CTCAGCGGCT CGGTCGCCGA AGTGCCCGCC GCGCTGCTCG ACCAGCTCAA GGTCGGCGGC
CGGCTCAGCG CCATCGTCGG CGACGAGCCC ATGATGCGCG CCACGCTGAT CACCCGCGTC
GGCAAGGACT CATTCCGCAC TACCCAGGCC TGGGACACGG TGGCGCCCCG GCTGCTCAAT
TTCCCCGCGC CGTCGAAATT CACTTTCTGA
 
Protein sequence
MNYEQARFNM IEQQIRPWEV LDNQVLSLLA VMRREDFVPP ACKALAFTDM EIPLPPHKNP 
GQCMLAPRVE ARILQDLAVQ KHEKVLEIGT GSGFMAALLA HRAQQVITLE IEPELAETAR
RNLQKAGIYN AEVRQADGAA NLAEAVSGNG PLRGPFDVIV LSGSVAEVPA ALLDQLKVGG
RLSAIVGDEP MMRATLITRV GKDSFRTTQA WDTVAPRLLN FPAPSKFTF