| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1122 |
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| Symbol | |
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| ID | 4688831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1195203 |
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| End bp | 1196363 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834126 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_981359 |
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| Protein GI | 121604030 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.444821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA CCCCAGCTAC CGGACTGCCC CTGGAAGGCG TTCGCGTCAT CGAATTCACC
CACATGGTCA TGGGTCCGGC CTGCGGCATG ATCCTGGCCG ACCTGGGCGC CGAGGTCATC
AAGATCGAGC CGCCCGGCGG CGACAAGACG CGCAGCCTGC CGGGCCTGGG CATCGGCTTT
TTCCGCAGCT TCAACCGCAA CAAGAAAAGC GTGGTGCTCG ACATCACGAC CGAAGAAGGC
CAGCAAACCG CCAGGGCCCT GATCGCCCAG TGCGACGTGC TGCTGGAGAA CTTTCGCCCC
GGCCTGATGG CCAGGCTCGG CCTGGACTAC GACAGCCTCA AAGCCGCCAA CCCGCGCCTG
ATCTACGTCA GCCACAAGGG CTTTTTGCCC GGCCCCTATG AAAAGCGCCT GGCGCTCGAC
GAGGTGGTTC AGATGATGGG CGGCCTGTCC TACATGACCG GCCCCGAAGG CCGGCCGCTG
CGCGCGGGCA CCTCGGTCAA CGACATCATG GGCGGCATGT TCGGCGCCAT CGGCGTGCTG
GCCGCGCTGC GCGAGCGCGA CAAGACAGGC GCCGGCCAGG AAATCCAGAG CGCGCTGTTC
GAGAACTGCG TTTTCCTGAG CGCCCAGCAC ATGCAGCAGT TCCAGATGAC CGGCGAGCCG
CCGCCGCCCA TGCCGTCGCG CGTGTCAGCC TGGAGCGTGT ACGACGTGTT CACGCTGGCC
GAAGGCGAGC AGCTGTTCAT CGGCGCGGTC AACGACAAGC AGTGGCTGAC CCTGTGCCGG
GTGCTTGATT GCCCCGAACT GGTTGCAGAC CCGGGCTTGC AGACCAATGC CCAGCGCGTC
GCGGTGCGCC CGGAACTGCT GGCCAGGCTG GGGGAAATCC TCAGGCACCG CGAGGCCGGC
GAGCTGTCCC TCAAGTTAGA AGCCGCCGGC ATTCCCTACG CGCCCATCAT GCGGCCCGAC
CAGCTGGTGA ATGACCCGCA CCTCAAGGCC AGCGGCGGCC TGGCCCCCAT GCAACTCGAA
GATGGCGGCA TGACCGACGT GGTCTTGCTG CCGTTGACGC TGGGCGGGCG CCGTCCCGGG
GTGCGCCAGC CGCTGGCCCG CGTGGGCGAG CACACCGAGG AAGTCCTTGG CGCACTGCAG
CAACACGCGC CAGCCCAGTA A
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| Protein sequence | MKNTPATGLP LEGVRVIEFT HMVMGPACGM ILADLGAEVI KIEPPGGDKT RSLPGLGIGF
FRSFNRNKKS VVLDITTEEG QQTARALIAQ CDVLLENFRP GLMARLGLDY DSLKAANPRL
IYVSHKGFLP GPYEKRLALD EVVQMMGGLS YMTGPEGRPL RAGTSVNDIM GGMFGAIGVL
AALRERDKTG AGQEIQSALF ENCVFLSAQH MQQFQMTGEP PPPMPSRVSA WSVYDVFTLA
EGEQLFIGAV NDKQWLTLCR VLDCPELVAD PGLQTNAQRV AVRPELLARL GEILRHREAG
ELSLKLEAAG IPYAPIMRPD QLVNDPHLKA SGGLAPMQLE DGGMTDVVLL PLTLGGRRPG
VRQPLARVGE HTEEVLGALQ QHAPAQ
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