| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1109 |
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| Symbol | |
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| ID | 4688450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1184262 |
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| End bp | 1185386 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834114 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_981347 |
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| Protein GI | 121604018 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.316651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGGAA ATGACGGTGA TGGCCCGCAA CGCGCCCGTC AGGCCTCCCG CGTGAAAATC
CTGCTGGTCA AGCTGTCGTC CCTGGGCGAT GTGGTCCATG CCCTGCCGGT CGTGCAGGAC
ATCCATGCCG CCTTTCCCGG AGCGCAGATT GACTGGGTGG TTGAACAATC GTTTGCCCCG
GTGCTGGCCT TGAATGCCGG GTTGAACCGC ATCATTCCCT GCCAAATCCG GCGCTGGCGC
AAATCGCCCC TGGCGGCGGC GACGCGCCAG CAGTGGAACG CCTTCAAGGC CGATTTGCGG
CAGACCGACT ACGACGCAGT GATCGACCTG CAGGGCCTGA CCAAATCGGC GCTGGTGGCG
CGGCTGGCGC GGCTGGCGCC CGGCGGCAAG CGTTACGCGC TGGCCAACCA GACCGAAGGC
TCGGGCTACG AAGCGCCAAC GCGCTGGCTG GCCGACGTGG CCATCCGCAT CACGCCGCAC
ATCCACGCCG TGCAGCGCTC GCGCGAGTTG GCGGCCCGGG CGCTGGGCTA CACCTTCCCG
CCAAGCCCTG ACTTTGGATT AAAAAGGCAT TTTGCGCAGG CTGAGCATGC ATTTGCAGCT
CCTGAAAGAA TAGCAAATAC GGTGGCGTTC GTGCATGGCA CCTCGCGCGC CGACAAGGAA
TGGCCGCTGG TGTACTGGAC CGCCCTGGGC CGCCGCCTGA ACGCGGCCGG CTACCAGATC
GTGCTGTCGC ATGGCAATGC CAAGGAGCAG GCCAAAAGCC AGGCCATCGC CCGGGTGCTC
AACGAGAGCG CGCCCGGCCA TGCCCTCGTC TGGCCGCTGC TGCCGCTCGA TGCGCTGACG
CAGGAGCTGG CGCGCTGCGT CGGCGTGATT GGCGTGGACA GCGGCGTCAG CCACATCGCC
GTGGCGCTCG ACCTGCCGCA TGTGCAGCTC TACAACTTCG ACACCGCCTG GCGCACCGGC
CCCGATTCAG CCGCCGGCCG GCAGGTCAGC GTGTTCGCCA AGCCCGTGCC CAGCGTGGAC
GATGTCTGGC AGGCCTGGCT GGGCTGCCTT GAAATGGTCA AGGGCAAGCC GTCCGATTCA
CTCGATCCAC TCGCTTCATC AGGCTGCGGG GCTGGCGGCG CATGA
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| Protein sequence | MRGNDGDGPQ RARQASRVKI LLVKLSSLGD VVHALPVVQD IHAAFPGAQI DWVVEQSFAP
VLALNAGLNR IIPCQIRRWR KSPLAAATRQ QWNAFKADLR QTDYDAVIDL QGLTKSALVA
RLARLAPGGK RYALANQTEG SGYEAPTRWL ADVAIRITPH IHAVQRSREL AARALGYTFP
PSPDFGLKRH FAQAEHAFAA PERIANTVAF VHGTSRADKE WPLVYWTALG RRLNAAGYQI
VLSHGNAKEQ AKSQAIARVL NESAPGHALV WPLLPLDALT QELARCVGVI GVDSGVSHIA
VALDLPHVQL YNFDTAWRTG PDSAAGRQVS VFAKPVPSVD DVWQAWLGCL EMVKGKPSDS
LDPLASSGCG AGGA
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