Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1108 |
Symbol | |
ID | 4688382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1182815 |
End bp | 1184197 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834113 |
Product | phosphomannomutase |
Protein accession | YP_981346 |
Protein GI | 121604017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.813588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTAG CAGCATCGAT TTTCAAGGCC TATGACATTC GCGGCATCGT CCCCGCCACC GTCACCGAGG AGGTCGCCGA GGGCATCGGC AAGGCCTTTG GAACCATTGC GCTGGCGCAG GGTGAAACCG CCGTGGCCGT GGGGCGCGAT GGCCGCCTGA GCGGCCCGTC CATCAGCGCC GCCCTGGTGC GCGGCCTGAG CGCCGTCGGC ATCGAGGTGA TCGATGTCGG CATGGTCACC ACGCCGATGC TCTACTTTGC GGCCAACACG CTGTGCAGCT CCGGCATTCA GGTCACTGGC AGCCACAACC CCAAGGACTA CAACGGCTTC AAGATGGTCA TGGCCGGGCG CGCCATCTAC GGCGACGACA TCCAGGCCAT CCGCGCCATG ATGGAAGGCG AAACCTGGGC GCTCAAGGAC AGCGGCAGCG TGCGCCATGT CGATGTGACG GCCGCCTACC AGGAGCGCAT CGTGTCCGAC ATCAAGCTGT CCCGGCCGAT GAAGATCGTC GTCGATTGCG GCAACGGCAT TGCCGGCGCG ACGGCTCCGG CCATCTTCCG CGCCATCGGC TGCGAGGTGA TCGAGCTGTT CAGCGAAGTC GATGGCAACT TTCCCAACCA CCATCCCGAC CCCAGCAAGC CCGAGAACCT GCAGGATCTG ATCAAGACCC TGCAGGCCAG CGACGCCGAA CTCGGCCTGG CCTTCGACGG CGACGGCGAC CGCCTGGGCA TCGTCACCAA GGACGGCCAG AACATCTACC CCGACCGCCA GATGATGCTG TTTGCCAGAG ACGTGCTCTC GCGCGTGCCC GGCGGCACGA TTGTCTTTGA CGTGAAATGC TCGCAGCGCC TGGCGCCCGA CATCGAGCAA GCCGGCGGCG TGCCGCTGAT GTTCAAGACC GGCCATTCGC TGATCAAGGC CAAGATGAAG GAAGTCAACT CGCCGCTGGG TGGCGAGATG AGCGGCCACA TCTTCTTCAA GGAGCGCTGG TACGGTTTTG ACGACGGCAC CTACGCCGGC ACGCGCCTGC TGGAAATCGT CAGCAAGGCG CCGGACGCCG GCGTGCTGCT CAACAGCCTG CCGACCAGCT TCAGCACGCC CGAGATCAAC GTGCCCTGCG CCGAAGGCGA GCAGCACACG GCCGTGGCCG CGCTCATCCA GGCCGCGCAT TTTGAAGCGC CCGCGAAAAT CTCGACCATC GACGGCGTGC GCGTGGACTG GCCGGACGGC TTTGGCCTGA TCCGCGCGTC CAACACCACG CCGGTGCTGG TGCTGCGCTT TGAAGGCCAG ACGCAAGCGG CGCTGGACCG CATCCAGGCC GACATGCTGG TGCTGCTGCG CAGCGTGAAA CCCGACGCGG TGTTCGCAGC GGCCGCGCAT TGA
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Protein sequence | MQVAASIFKA YDIRGIVPAT VTEEVAEGIG KAFGTIALAQ GETAVAVGRD GRLSGPSISA ALVRGLSAVG IEVIDVGMVT TPMLYFAANT LCSSGIQVTG SHNPKDYNGF KMVMAGRAIY GDDIQAIRAM MEGETWALKD SGSVRHVDVT AAYQERIVSD IKLSRPMKIV VDCGNGIAGA TAPAIFRAIG CEVIELFSEV DGNFPNHHPD PSKPENLQDL IKTLQASDAE LGLAFDGDGD RLGIVTKDGQ NIYPDRQMML FARDVLSRVP GGTIVFDVKC SQRLAPDIEQ AGGVPLMFKT GHSLIKAKMK EVNSPLGGEM SGHIFFKERW YGFDDGTYAG TRLLEIVSKA PDAGVLLNSL PTSFSTPEIN VPCAEGEQHT AVAALIQAAH FEAPAKISTI DGVRVDWPDG FGLIRASNTT PVLVLRFEGQ TQAALDRIQA DMLVLLRSVK PDAVFAAAAH
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