Gene Pnap_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1108 
Symbol 
ID4688382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1182815 
End bp1184197 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content65% 
IMG OID639834113 
Productphosphomannomutase 
Protein accessionYP_981346 
Protein GI121604017 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.813588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTAG CAGCATCGAT TTTCAAGGCC TATGACATTC GCGGCATCGT CCCCGCCACC 
GTCACCGAGG AGGTCGCCGA GGGCATCGGC AAGGCCTTTG GAACCATTGC GCTGGCGCAG
GGTGAAACCG CCGTGGCCGT GGGGCGCGAT GGCCGCCTGA GCGGCCCGTC CATCAGCGCC
GCCCTGGTGC GCGGCCTGAG CGCCGTCGGC ATCGAGGTGA TCGATGTCGG CATGGTCACC
ACGCCGATGC TCTACTTTGC GGCCAACACG CTGTGCAGCT CCGGCATTCA GGTCACTGGC
AGCCACAACC CCAAGGACTA CAACGGCTTC AAGATGGTCA TGGCCGGGCG CGCCATCTAC
GGCGACGACA TCCAGGCCAT CCGCGCCATG ATGGAAGGCG AAACCTGGGC GCTCAAGGAC
AGCGGCAGCG TGCGCCATGT CGATGTGACG GCCGCCTACC AGGAGCGCAT CGTGTCCGAC
ATCAAGCTGT CCCGGCCGAT GAAGATCGTC GTCGATTGCG GCAACGGCAT TGCCGGCGCG
ACGGCTCCGG CCATCTTCCG CGCCATCGGC TGCGAGGTGA TCGAGCTGTT CAGCGAAGTC
GATGGCAACT TTCCCAACCA CCATCCCGAC CCCAGCAAGC CCGAGAACCT GCAGGATCTG
ATCAAGACCC TGCAGGCCAG CGACGCCGAA CTCGGCCTGG CCTTCGACGG CGACGGCGAC
CGCCTGGGCA TCGTCACCAA GGACGGCCAG AACATCTACC CCGACCGCCA GATGATGCTG
TTTGCCAGAG ACGTGCTCTC GCGCGTGCCC GGCGGCACGA TTGTCTTTGA CGTGAAATGC
TCGCAGCGCC TGGCGCCCGA CATCGAGCAA GCCGGCGGCG TGCCGCTGAT GTTCAAGACC
GGCCATTCGC TGATCAAGGC CAAGATGAAG GAAGTCAACT CGCCGCTGGG TGGCGAGATG
AGCGGCCACA TCTTCTTCAA GGAGCGCTGG TACGGTTTTG ACGACGGCAC CTACGCCGGC
ACGCGCCTGC TGGAAATCGT CAGCAAGGCG CCGGACGCCG GCGTGCTGCT CAACAGCCTG
CCGACCAGCT TCAGCACGCC CGAGATCAAC GTGCCCTGCG CCGAAGGCGA GCAGCACACG
GCCGTGGCCG CGCTCATCCA GGCCGCGCAT TTTGAAGCGC CCGCGAAAAT CTCGACCATC
GACGGCGTGC GCGTGGACTG GCCGGACGGC TTTGGCCTGA TCCGCGCGTC CAACACCACG
CCGGTGCTGG TGCTGCGCTT TGAAGGCCAG ACGCAAGCGG CGCTGGACCG CATCCAGGCC
GACATGCTGG TGCTGCTGCG CAGCGTGAAA CCCGACGCGG TGTTCGCAGC GGCCGCGCAT
TGA
 
Protein sequence
MQVAASIFKA YDIRGIVPAT VTEEVAEGIG KAFGTIALAQ GETAVAVGRD GRLSGPSISA 
ALVRGLSAVG IEVIDVGMVT TPMLYFAANT LCSSGIQVTG SHNPKDYNGF KMVMAGRAIY
GDDIQAIRAM MEGETWALKD SGSVRHVDVT AAYQERIVSD IKLSRPMKIV VDCGNGIAGA
TAPAIFRAIG CEVIELFSEV DGNFPNHHPD PSKPENLQDL IKTLQASDAE LGLAFDGDGD
RLGIVTKDGQ NIYPDRQMML FARDVLSRVP GGTIVFDVKC SQRLAPDIEQ AGGVPLMFKT
GHSLIKAKMK EVNSPLGGEM SGHIFFKERW YGFDDGTYAG TRLLEIVSKA PDAGVLLNSL
PTSFSTPEIN VPCAEGEQHT AVAALIQAAH FEAPAKISTI DGVRVDWPDG FGLIRASNTT
PVLVLRFEGQ TQAALDRIQA DMLVLLRSVK PDAVFAAAAH