| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1104 |
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| Symbol | |
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| ID | 4686916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1174988 |
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| End bp | 1177177 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834109 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_981342 |
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| Protein GI | 121604013 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACC CGCAAGAGAT TGAACTGATT TGCAGCGCCC GCCACGGCGA CCCGTTCTCG
GTGCTGGGGC CGCATGCGCA GGACGGTGGC CTGTCCATCC GCGCCTTCCT GCCCAACGCC
CGGCAGGTCG AGGTGATTGA TGCCTGCTCG GGCCATCGGC TCGGCATGCT TGAGAAACAC
CATCCCGACG GATTTTTCGA AGGCGTTCTG GCGCTGCAGG CATCAGCGGC TTACGGATTG
CAGGTGCAGT GGGACAACTA CCAGACGGCC CTGATTGAAG ACCCCTACCG CTTCGGGCCG
GTGCTGGGCG AGGTGGATGT CTGGCTGCTC AGCGAAGGCA CGCACCTGCG GCCCTATGAG
ATTTTGGGCG CCAACCAGCG CGTGATGGAC GGCGTGGCCG GCACCAGCTT TGCCGTGTGG
GCGCCGCATG CCGCGCGCGT CAGCGTGGTG GGCGACTTCA ATGTCTGGGA CGGCCGGCGC
CACCCGATGC GGCTGCGGCG CGAGTGCGGC GTCTGGGAGA TTTTCCTGCC CGGCGTGGCG
CTGGGCGCGC GCTACAAGTT TGAAATCCTC GCCGCCGATG GCCAGGTGCT GCCGGCCCGC
GCCGACCCGT ATGCGCGCCA AGCCGAATTG CGCCCGGCCA CGGCCAGCAT CGTGGCAGGC
ATGCCGGCGC TCAAGCCTCC TTCAAATGAA CGCCGGCAAG CCAATGCGCT GGATGCGCCG
ATGAGCATCT ACGAAGTCCA CCTGGGTTCG TGGCGGCGCA TCCTTGACCC GGCCAGCGGC
TGGCAGCGCT GGCTGAACTG GGACGAACTC GCCGACCAGC TGGTGCCCTA CGCGCTGGAC
ATGGGTTTTA CCCACCTTGA ACTGCTGCCG GTCAGCGAAC ATCCGTTTGA CGGCTCCTGG
GGCTATCAGC CAGTCGGCCT GTATGCGCCC ACGTCGCGTT TTGGCGATGC CGACGGCCTG
GTGCGTTTCA TCGCGCGCTG CCACGCGTCG GGCATCGGCG TGCTGCTCGA CTGGGTGCCG
GCGCACTTTC CGACCGACGC GCACGGGCTG GGCAATTTTG ACGGCACGCC GCTGTACGAA
TACGCCGATC CGCGCGAAGG CTTTCACAAC GACTGGAACA CGCTGATCTA CAACCTGGGC
CGCACCGAGG TGCGCAACTT CCTGATCGGC AACGCGCTGT ACTGGCTGGA GCGCTTCGAT
GTCGATGGCC TGCGCGTCGA TGCGGTGGCG TCGATGCTCT ACCGCGACTA CAGCCGCAAG
CCCGGCGAAT GGATTCCCAA CCGGCATGGC GGGCGCGAGA ACCTGGAAAC CATAGACTTC
CTCAAGCGCA TGAACGACAT CGTTGTCCAG GAGCGGCCGC AAGCCGTCAC CATGGCCGAA
GAATCGACCT CGTTTCCCGG CGTGTCGCGC CCGACGACGG CCGGCGGCCT GGGTTTTCAC
TACAAGTGGA ACATGGGCTG GATGCATGAC ACGCTGCAGT ACATGGCGCG CGACCCGGTG
CATCGCCAGC ATCACCAGGG CGAAATGACG TTCGGCCTGG CCTATGCCTT CAGCGAAAAC
TTCGTGCTGC CGATCTCGCA CGACGAGGTG GTGCATGGCA AGGGCTCGCT GCTGGGCAAG
ATGCCCGGCG ACCGCTGGCA GCAGTTCGCC AACCTGCGCG CCTACCTGGG CTTCATGTTC
GGCCACCCCG GCAAGAAGCT GCTGTTCATG GGCTGCGAAT TCGCGCAGCT GCGCGAATGG
AACCACGACC AGAGCCTGGA CTGGCACCTG CTGGATGACC CGCAACACGC CGGCGTGCAG
CGCCTGGTGC GCGACCTAAA CCAGCTCTAC CGCGCCACCC CGGCGCTGTA CCAGCTCGAC
TTTGTACCTG CCGGTTTTGA GTGGATGGAC CACCAGGATG CCGCGCATTC GGTGCTCGCC
TTCATCCGGC GCGGCCTGGA TGCACGGAGT TTTATTTTGG TGGTCTGCAA CTTCACCCCC
ACCGTGCAGA CGGCTTACCG CGTCGGCGTT CCCCAGCCCG GCGAATACCG CGAGCGGCTC
AACACCGACT CGGCCCATTA CGGCGGCAGC AATGCCGGCA CGCCGCTGGG CGCCGCCACG
GCGGAACCCG TGGGCTGGCA CGGCCAGCCG CAGTCCCTTT TGCTGAACCT GCCGCCGCTG
GCCACCGTGG TGTTCGAATG GACCGCTTGA
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| Protein sequence | MLNPQEIELI CSARHGDPFS VLGPHAQDGG LSIRAFLPNA RQVEVIDACS GHRLGMLEKH
HPDGFFEGVL ALQASAAYGL QVQWDNYQTA LIEDPYRFGP VLGEVDVWLL SEGTHLRPYE
ILGANQRVMD GVAGTSFAVW APHAARVSVV GDFNVWDGRR HPMRLRRECG VWEIFLPGVA
LGARYKFEIL AADGQVLPAR ADPYARQAEL RPATASIVAG MPALKPPSNE RRQANALDAP
MSIYEVHLGS WRRILDPASG WQRWLNWDEL ADQLVPYALD MGFTHLELLP VSEHPFDGSW
GYQPVGLYAP TSRFGDADGL VRFIARCHAS GIGVLLDWVP AHFPTDAHGL GNFDGTPLYE
YADPREGFHN DWNTLIYNLG RTEVRNFLIG NALYWLERFD VDGLRVDAVA SMLYRDYSRK
PGEWIPNRHG GRENLETIDF LKRMNDIVVQ ERPQAVTMAE ESTSFPGVSR PTTAGGLGFH
YKWNMGWMHD TLQYMARDPV HRQHHQGEMT FGLAYAFSEN FVLPISHDEV VHGKGSLLGK
MPGDRWQQFA NLRAYLGFMF GHPGKKLLFM GCEFAQLREW NHDQSLDWHL LDDPQHAGVQ
RLVRDLNQLY RATPALYQLD FVPAGFEWMD HQDAAHSVLA FIRRGLDARS FILVVCNFTP
TVQTAYRVGV PQPGEYRERL NTDSAHYGGS NAGTPLGAAT AEPVGWHGQP QSLLLNLPPL
ATVVFEWTA
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