| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1103 |
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| Symbol | |
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| ID | 4687771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1172904 |
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| End bp | 1174991 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834108 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_981341 |
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| Protein GI | 121604012 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.512458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACCCG TCCTGCTGCC CGGCCGGCCC TGGCCGCTGG GCGCCACCTG GGACGGCTAC
GGCGTGAACT TCGCGGTGTT TTCGGCGCAC GCGCAGGCCA TGGCGCTGTG CCTGTTCGAC
GAGGCCGGCA CGCTGGAGAC CAGCCGCCTG ATGCTGCCCG CGCACACCGA CGATGTCTGG
CACGGCTACC TGATTGGCGC CGCGCCCGGC CTGATCTACG GCCTGCGCGC CGACGGCCTG
TGGCGGCCCG ACCGGGGCCA CCGCTTCAAC CCCCACAAGC TGCTGCTCGA CCCCTATGCC
CGCGAGGTCG TCGGTGATTT CGAGTGGCGC GATGAACACT TCGGCGCCGA CCGCCAGCAT
CCGCTGCACA TGGACACGCG TGACAATGCC GCGCTGGCGC TTAAAAGCCG GGTGGTGCAT
GACAGTTTCG ACTGGGAAGG CGACCAGCCG CCGTGCATTG CGCTGCAGGA CACGGTGTTG
TATGAGCTGC ACGTCAAGGG CTTTTCCCGG CTGAACCCCC AGGTGCCCGA AGCGCTGCGC
GGCAGCTATG CCGGGCTGGC CCATCCGGCG TCGCTGGCGC ATCTGCAGCG CCTGGGCGTC
ACCAGCGTCA GCCTGCTGCC GGTTCACCAG GCGCTCGATG AAGAGCGGCT GGCCGGCATG
GGCCTGACGA ACTACTGGGG CTACAACACG CTGGCTTTCT TTGCGGCCAG CCCCCGGCTG
GCGTGCGGCC AGGACGGACT GACACCGCGC GATGAGTTCC GCGCCATGGT CAAGACGCTG
CATGCGCAGA GCATCGAGGT GCTGCTCGAC GTGGTGTTCA ACCACAGCGC CGAATCCGAT
GGCACCGGCC CGACCTTGAG CTTTCGCGGG CTCGACAACG CCAGCTACTA CCGCCATCCG
CCCGAGTCGC CCGCTGCCTT CGAGAACCAC AGCGGCTGCG GCAACACGCT GGACATCCGC
CAGCCCAGAG TCTTGCAACT GGTCATGGAC AGCCTGCGCT ACTGGGTCAG CGAGATGCAT
GTCGATGGTT TCAGGTTCGA CCTGGCGCCG GTGCTGGGCC GGGGCGACCA CGGCTTCGAG
CCGGGCGGCG CCTTTTTTAC CGCCGTGGCG CAGGATCCGG TGCTGTCGCA GGTGAAGATG
ATTGCCGAGC CCTGGGACAT CGGCCCGGGC GGCTACCAGG TCGGCGGCTT TCCGCGCGGC
TGGCTCGAAT GGAACGACCA TTTCCGCGAC GTGATGCGCG GCTTCTGGCT GCAGGACGAC
GATACGGCCC GCTCGCGCGG CGATTTTGCG CTGCGCCTGT GCGCCTCGTC CGACCTCTAC
CAGCGGCGCA ACCGCGCGCC CAGCGTGTCG GTCAATTACG TGGTGTCGCA CGACGGCTTC
ACGCTGCGCG ACCTGGTCAG CTACAACGAG CGCCACAACG AAGCCAACGG CGAGGACAAC
CGCGATGGCC ACGGCCACAA CCTGAGCAGC AACTGCGGCA TTGAGGGCGA GACCGATGAC
CCGCAGGTCA ATGAGCTGCG CGGCCGGTTG CAGCGCGCCC TGCTCGCCAC CACCCTGCTG
GCGCAAGGCA CGCCGATGCT GTGCGCCGGC GACGAACTCG GCCACAGCCA GCGCGGCAAC
AACAACCCCT ATTGCCAGGA CAACGAAATC ACCTGGATTG ACTGGACGCA AGCCGACGGC
GACCTGATCG ACTTCACCGC CTGGGTGCTG TCGCTGCGCC GCCAGCTGCT GCCCTTCGGC
AACCACTGGT ACAGCGGTTT GAGTGACACG CTGGGCCTGC ATGACCTGTC GTGGCTGCAC
AGCAGCGGCC AGGCCTTGCA GGGCCAGGCG TGGCAGGGCA ACAGCGAGCG CGTGCTCGGC
TGCCTGATCG GCCGGCCGGG CCGCGCCCGG GCGCCGCTGC TGCTGCTGGT CAACCCCGAT
GCCGACGAGC ATGATTTCAT GCTGCCCGCC GGCGTCTGGC AAGCCGTGCT CGACACCGCC
CATCCGCGCG GCCTGACCCG CTGGCACGGC CAGGGCGAAG CGCCCCTGCG GCTGTCCGCC
CACAGCCTGA TGCTGCTGGT GGCGGCCGGC ACCGTACTCA CCTTTTGA
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| Protein sequence | MKPVLLPGRP WPLGATWDGY GVNFAVFSAH AQAMALCLFD EAGTLETSRL MLPAHTDDVW
HGYLIGAAPG LIYGLRADGL WRPDRGHRFN PHKLLLDPYA REVVGDFEWR DEHFGADRQH
PLHMDTRDNA ALALKSRVVH DSFDWEGDQP PCIALQDTVL YELHVKGFSR LNPQVPEALR
GSYAGLAHPA SLAHLQRLGV TSVSLLPVHQ ALDEERLAGM GLTNYWGYNT LAFFAASPRL
ACGQDGLTPR DEFRAMVKTL HAQSIEVLLD VVFNHSAESD GTGPTLSFRG LDNASYYRHP
PESPAAFENH SGCGNTLDIR QPRVLQLVMD SLRYWVSEMH VDGFRFDLAP VLGRGDHGFE
PGGAFFTAVA QDPVLSQVKM IAEPWDIGPG GYQVGGFPRG WLEWNDHFRD VMRGFWLQDD
DTARSRGDFA LRLCASSDLY QRRNRAPSVS VNYVVSHDGF TLRDLVSYNE RHNEANGEDN
RDGHGHNLSS NCGIEGETDD PQVNELRGRL QRALLATTLL AQGTPMLCAG DELGHSQRGN
NNPYCQDNEI TWIDWTQADG DLIDFTAWVL SLRRQLLPFG NHWYSGLSDT LGLHDLSWLH
SSGQALQGQA WQGNSERVLG CLIGRPGRAR APLLLLVNPD ADEHDFMLPA GVWQAVLDTA
HPRGLTRWHG QGEAPLRLSA HSLMLLVAAG TVLTF
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