Gene Pnap_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1098 
Symbol 
ID4689537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand+ 
Start bp1167496 
End bp1168161 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID639834103 
Producthypothetical protein 
Protein accessionYP_981336 
Protein GI121604007 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.184834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.524736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC ATGTTTCTGA AACCACGGGC GTGCAGCGCC TGCTCTCGGG CCTGCTGGCG 
GGGCTGGCGA CAGCTGCGCT GCCGCTGCCG CTGCCGCTGG TCTGGCAGTT TCGCGGCCTG 
CTGGGCTGGA GCGTTGGCGT GGCGGTTTAC CTGACGCTGG CCTGGTGGCT GTGCGAGCGC 
TTTGATGCCG AGCGCACCCG CGAGCGGGCG CAGGCGCAGG ATGAACCCAG CGTGGTGCTG 
TTCCTGCTGA TGCTGCTGGC GGCAATGGCC TGCGTGGCGG CCATCGTGGT GATGCAGCAG 
CAGGGCAAGG ATCTGACGGG CACCGAACGC AGCCTGCACA TCGCCGTGTC GGTGGTGGCG 
CTGATCGCCT CCTGGCTGTT CATCCAGACG ATTTTTGCGT TCCGCTATGC CCACCGCTAT 
TACCAGGAAG AACAGCGCGG GGAGCCGGGT GGGCCGGGCC TGCTGTTTCC GGGCGGGCTG 
GAGCCGGACT ATTTTGATTT TTTGTATTAC GCCCATGTGG TCGGCATGAC CTCGCAGGTG 
TCCGATGTGC AGGTCACCTC GCGCGAGATG CGCCGGCTCA CGCTGGTGCA CAGCGTGCTG 
TCGTTCGGCT TCAACATGCT GGTGCTGGCG CTCAGCATCA ATGTGGTGGC CGGCGCGCTG 
CAGTAG
 
Protein sequence
MRKHVSETTG VQRLLSGLLA GLATAALPLP LPLVWQFRGL LGWSVGVAVY LTLAWWLCER 
FDAERTRERA QAQDEPSVVL FLLMLLAAMA CVAAIVVMQQ QGKDLTGTER SLHIAVSVVA 
LIASWLFIQT IFAFRYAHRY YQEEQRGEPG GPGLLFPGGL EPDYFDFLYY AHVVGMTSQV 
SDVQVTSREM RRLTLVHSVL SFGFNMLVLA LSINVVAGAL Q