Gene Pnap_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1082 
Symbol 
ID4689212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1149665 
End bp1151002 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content64% 
IMG OID639834082 
Productargininosuccinate synthase 
Protein accessionYP_981320 
Protein GI121603991 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.92431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA TTCTCCAAAA CCTCCCCATC GGCCAAAAAG TCGGCATCGC CTTTTCCGGC 
GGCCTGGACA CCAGCGCCGC GCTGCACTGG ATGAAGCTCA AGGGCGCGAT TCCCTACGCC
TACACCGCCA ACCTGGGCCA GCCCGACGAG CCCGATTACG AAGACATCCC GCGCAAGGCG
ATGCAGTACG GCGCCGAGCA AGCGCGGCTG ATCGACTGCC GCAGCCAACT GGCCGCCGAA
GGACTGGCCG CGCTGCAGGC TGGCGCCTTT CACATCACGA CCGCCGGCGT GACCTACTTC
AACACCACGC CGCTGGGCCG CGCCGTGACC GGCACCATGC TGGTCGCCGC AATGAAGGAA
GACGATGTCA ACATCTGGGG CGACGGCAGC ACCTACAAGG GCAACGACAT CGAGCGCTTC
TACCGCTACG GCCTGCTGAC CAACCCGTCG CTGAAAATCT ACAAGCCCTG GCTGGACCAG
TTGTTCATCG ACGAGCTGGG CGGACGCGCC GAAATGTCCG AATTCATGAC GCAAGCGGGC
TTCGGCTACA AGATGTCGGC CGAAAAAGCC TATTCGACCG ACTCCAACAT GCTGGGCGCG
ACGCACGAGG CGAAAGACCT GGAGCACCTG AGCAGCGGCA TGAAGATCGT CAACCCGATC
ATGGGCGTGG CCTTCTGGAA GGATGAAGTC GAGGTCAAGC GCGAGGAGGT CACGGTGCGC
TTTGAAGAAG GCCGGCCGGT CGCGCTGAAC GGCGTCGAGT ACCCCGACCT GGTCGAGCTG
ATCCTGGAAG CCAACCGCAT CGGCGGGCGC CACGGCCTGG GCATGAGCGA CCAGATCGAA
AACCGCATCA TCGAGGCGAA AAGCCGGGGC ATCTACGAGG CGCCCGGCTT GGCGCTGCTG
TTCATCGCCT ACGAGCGGCT GGTCACCGGC ATCCACAACG AGGACACCAT CGAGCAGTAC
CGCGACAGCG GCCGCCGCCT GGGCCGCCTG CTCTACCAGG GCCGCTGGTT CGACTCGCAG
GCCATCATGC TGCGCGAGAC CGCCCAGCGC TGGGTCGCCA GCGCCATCAC CGGCGAAGTG
ACGATTGAGC TGCGCCGGGG CAATGATTAC TCGATCCTGA ACACCGAGTC GGCCAACCTG
ACCTACCAGC CCGAGCGGCT GAGCATGGAA AAAGTCGAAG GCGCGTTCAC GCCGCTGGAC
CGCATCGGTC AGCTGACCAT GCGCAACCTG GACATCGTGG ACACGCGCGC CAAGCTGGGC
ATTTATGCCA AGAGCGGGGT GCTGTCGCTA GGCACGGGTG GGGATTTGCT GAACCTGACG
GGCAAAGCCG CCGAGTAA
 
Protein sequence
MATILQNLPI GQKVGIAFSG GLDTSAALHW MKLKGAIPYA YTANLGQPDE PDYEDIPRKA 
MQYGAEQARL IDCRSQLAAE GLAALQAGAF HITTAGVTYF NTTPLGRAVT GTMLVAAMKE
DDVNIWGDGS TYKGNDIERF YRYGLLTNPS LKIYKPWLDQ LFIDELGGRA EMSEFMTQAG
FGYKMSAEKA YSTDSNMLGA THEAKDLEHL SSGMKIVNPI MGVAFWKDEV EVKREEVTVR
FEEGRPVALN GVEYPDLVEL ILEANRIGGR HGLGMSDQIE NRIIEAKSRG IYEAPGLALL
FIAYERLVTG IHNEDTIEQY RDSGRRLGRL LYQGRWFDSQ AIMLRETAQR WVASAITGEV
TIELRRGNDY SILNTESANL TYQPERLSME KVEGAFTPLD RIGQLTMRNL DIVDTRAKLG
IYAKSGVLSL GTGGDLLNLT GKAAE