Gene Pnap_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1081 
Symbol 
ID4689274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1148535 
End bp1149587 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID639834081 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_981319 
Protein GI121603990 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTCG AGAAAAATGT TCCCCTCCAG TCTTCCAACA CCTTCGGTAT CAATGCCAAG 
GCGCTTTCCC TGGCGCGCAT CCGCAGCGAA GCCGATATTG CCGCCGTGCT GCAGGACGCG
GCATGGCGGG CGGCGCCCAA GTTTATTCTG GGCGGCGGCA GCAACATCGT GCTGACCGGC
GATGTCAAAC CGCTGGTGCT CAAGGTCGAG ATCATGGGCA AGCGCCTGGC CGCTGAGACC
GCCAAGGCCT GGATCGTCGA GGCCGGCGCC GGTGAAAGCT GGCACGGGCT GGTCACCTGG
ACGCTGCAAA ACGGCTTTCC CGGCCTGGAA AACCTGGCGC TGATTCCCGG CACGGTCGGC
GCCTCGCCGG TGCAGAATAT CGGCGCTTAC GGCGTCGAGC TGCAGGACCG CTTCGACTCG
CTCGACGCCG TGGACCTGAC GACCGGCCAG CCCTTCACGC TCAATGCGGC GCAATGCGCC
TTCGGCTACC GCGATTCGGT GTTCAAGCAT GCCAGCTCCG GCGCCGCCGG TTTCGGCCTG
GCCGGCAAGG CCATCATCAC CCGCGTGCGC TTCTTGCTGC CCAAGGCCTG GAAACCGGTG
CTCGGTTATG CGGATATCGA GAAAAAGATG CTTTTGCGCA AGGTGGACGT GCCTGATGCG
CTACAAATTT ATGAGTGGAT CTGCGAGATT CGCCGCGCCA AGCTGCCCGA CCCCAAGGTC
ATCGGCAATG CCGGCAGCTT CTTCAAGAAC CCGACCGTCT CGCCCGAGCA GTGCGAGGAC
ATCATCCAGC GCGATCCGAA AATCGTTCAT TACCAGCTGG CCGACGGCTC GGTCAAGCTC
GCGGCCGGCT GGCTGATCGA CGCCTGCGGC TGGAAGGGCA AGTCCATCGG CAATGCCGGC
GTGTACGACA AGCAGGCGCT GGTGCTCGTC AACCGGGGCG GCAGCGCCAA CCCGGTGACC
GGCGGCGAAG TGATGACGCT GGCCAAGGCG ATCCAGACCA GCGTCTATGA ACGCTTTGGT
CTGCGGCTGG AGCCTGAGCC GGTGGTGGTT TAA
 
Protein sequence
MLVEKNVPLQ SSNTFGINAK ALSLARIRSE ADIAAVLQDA AWRAAPKFIL GGGSNIVLTG 
DVKPLVLKVE IMGKRLAAET AKAWIVEAGA GESWHGLVTW TLQNGFPGLE NLALIPGTVG
ASPVQNIGAY GVELQDRFDS LDAVDLTTGQ PFTLNAAQCA FGYRDSVFKH ASSGAAGFGL
AGKAIITRVR FLLPKAWKPV LGYADIEKKM LLRKVDVPDA LQIYEWICEI RRAKLPDPKV
IGNAGSFFKN PTVSPEQCED IIQRDPKIVH YQLADGSVKL AAGWLIDACG WKGKSIGNAG
VYDKQALVLV NRGGSANPVT GGEVMTLAKA IQTSVYERFG LRLEPEPVVV