Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1080 |
Symbol | |
ID | 4689599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1147992 |
End bp | 1148483 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639834080 |
Product | putative nucleotide-binding protein |
Protein accession | YP_981318 |
Protein GI | 121603989 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.240554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAT TCGATACCGT TCTTGAAACC GACCTGGTCA AGGTCAAAAA CGCCGTGGAA AACACCGCCA AGGAAATCGG CACCCGCTTT GACTTCAAGG GCACGGCCGC CTCGGCCGAA CTGAAGGAAA AAGACAAGGA GATCATCCTG ATCGGCGATG GCGATTTCCA GATCGAGCAG ATCCACGACA TCCTGCGCAA CAAGCTCACC AAGGCCGGCG TCGATGTGCG TTTTCTCGAC ATTGGCAAGG TCGAGAAAAT CGGTGGCGAC AAGGTCAAGC AGATCACCAA GGTGCGCGAC GGCATCGAAA CCGAAGAGGC CAAGAAAATC CAGCAGCTCA TCAAGGGCAA CAAGATGAAG GTGCAGGCCG CCATCCAGGA AGGCAAGGTC CGGGTCACCG GCGCCAAGCG CGACGACCTG CAGGCCGCGA TGGCCCTGAT CCGCGCCGAG ATCAAGGATT TGCCGCTGAG TTTCGACAAC TTTCGAGACT GA
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Protein sequence | MPSFDTVLET DLVKVKNAVE NTAKEIGTRF DFKGTAASAE LKEKDKEIIL IGDGDFQIEQ IHDILRNKLT KAGVDVRFLD IGKVEKIGGD KVKQITKVRD GIETEEAKKI QQLIKGNKMK VQAAIQEGKV RVTGAKRDDL QAAMALIRAE IKDLPLSFDN FRD
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