Gene Pnap_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1071 
Symbol 
ID4688155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1137922 
End bp1138521 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content63% 
IMG OID639834071 
ProductCheB methylesterase 
Protein accessionYP_981309 
Protein GI121603980 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.580355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.56368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCC TGAACCCTGC ACAAAGGCAA AGCGTCGAAG CGGTCGTGAT TGGCGCTTCG 
GCCGGCGGCG TGCAGGCCCT GCTGGCCTTG TTCTCCGGCT TGCCAGCCGG CTTTCGCCTG
CCCCTGATGG TGGTGCTGCA TTTGCCCGAA GACCGGGACA GCAAGCTGGC CGAGATTTTT
CAGCACCGCT TGCCGATTCC AGTGCGCGAA GCCGCCGACA AGGAACGCAT CGCACCGGGA
ACCCTGTATT TCGCCGGGCC GGGCTACCAC CTGTCGGTGG AAAGGGACCG GACTTTTTCA
TTGAGCGGCG AAGAACCGGT GCATTACTCG CGCCCCTCGA TTGACGTGCT GATGGAGTCT
GCCGTGGACG CTTATGGTGA CCGCCTGGCC GGGATTTTGC TCACCGGCGC CAACGCCGAC
GGCGCCGCCG GACTGGCTAA AATAGGCGAA CAAGGCGGGC TCACGGTGGT GCAGGATCCT
GCCGAAGCCC AGGCACCCAC CATGCCCGAA GCGGCCATCC GCATGCGGCA ACCCCATTTG
ATTCTCACTC TGGACGGCAT CCGCAGCCTG CTCCACCAAC TAGATACATC CTCATGCTGA
 
Protein sequence
MKPLNPAQRQ SVEAVVIGAS AGGVQALLAL FSGLPAGFRL PLMVVLHLPE DRDSKLAEIF 
QHRLPIPVRE AADKERIAPG TLYFAGPGYH LSVERDRTFS LSGEEPVHYS RPSIDVLMES
AVDAYGDRLA GILLTGANAD GAAGLAKIGE QGGLTVVQDP AEAQAPTMPE AAIRMRQPHL
ILTLDGIRSL LHQLDTSSC