Gene Pnap_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1062 
Symbol 
ID4687162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1121203 
End bp1122135 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content61% 
IMG OID639834061 
Producthypothetical protein 
Protein accessionYP_981300 
Protein GI121603971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.976574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.143905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC TTTCAACCAG CGGCCAGCAG GCCATCAACG ACATTGCCCA GCGCCACGGA 
TTCAGCACGG ATGCAGTCTC AAGCATGCTT GAATCCGTCA TCAACGGCAA CGGCAGCATG
GCGCAATTCA ACCACCCCGA GTTCAGCGGC TCCGGCCAGT GGATGAGCGG CGGCATGACC
ATGGTGTCCG ACATGTTCAA CAGCCAGCTC AAGGGCCGCG TCGATTCCCT GTGTTCCGAG
CTGGCCCGGC TGGTGGCGAA CCAGCCCGAC CTGCTCAGGA GCGGAAACTT CCAGTCGCAA
AACCAGGGCG GCCAGCAGCA GAGCAACCAT GCCGGCGAGC CATTCCAGAA CAACGGCCAG
GCGGCAATGA ACCCTTCGGC AAGCCTGTTT GTGCCTCCCG CCCCCGGCAC GTCGCCCGAC
TGGTGGCCGT CTGATCTGCG CTGGCCCAAC AGCACCGGCG CCCAGAACGG CGTTCGCTAT
GCCTACTTCG CGCAGGCGCG CCGGCTGGTC ATCGAGCTGA ACGGCACAGT GACCGTCTAT
GACACCCAGG ACCACCAGAT CGGCGGGTTT TCACAGCAGC AATCCTACGG CGGCTCGGTC
AATTTTTCCA GCCAGTACGG AATGCTTGAT GTGACCCGGC TGCCCATCGT GTCGGTCGAT
GGCGTTCAAC AGAACACCAA CGGCTTTGCC AATGCGCAGG CCACGGGTTT AGGGTTTGTC
CCCGAAAATT TGCCGCCCGC ACAGGTTTCA CAGCCCTCCC CGCCTTCCTC GCCCGCTTTC
AATTCCGCAG CGCAACAGCG CTCCGGCAAC GCCACAGCAG GCGATGCGGA TATTTTCCTC
ATGATCGAGA AGCTTGCCGA CTTGCGCAGC CGGGCCATCG TCAGCGACGA AGAATTCAAT
GCGAAGAAAA CTGAATTGCT GGCGCGGCTG TAG
 
Protein sequence
MKQLSTSGQQ AINDIAQRHG FSTDAVSSML ESVINGNGSM AQFNHPEFSG SGQWMSGGMT 
MVSDMFNSQL KGRVDSLCSE LARLVANQPD LLRSGNFQSQ NQGGQQQSNH AGEPFQNNGQ
AAMNPSASLF VPPAPGTSPD WWPSDLRWPN STGAQNGVRY AYFAQARRLV IELNGTVTVY
DTQDHQIGGF SQQQSYGGSV NFSSQYGMLD VTRLPIVSVD GVQQNTNGFA NAQATGLGFV
PENLPPAQVS QPSPPSSPAF NSAAQQRSGN ATAGDADIFL MIEKLADLRS RAIVSDEEFN
AKKTELLARL