Gene Pnap_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1045 
Symbol 
ID4689817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1107388 
End bp1108023 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID639834044 
Producthypothetical protein 
Protein accessionYP_981283 
Protein GI121603954 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0321486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.408994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACC AAGTCAAGGA AATTTTCTAC ACCCTGCAAG GCGAGGGCAG CCATGCCGGC 
CGGCCGGCGA TTTTTTGCCG TTTCGCCGGC TGCAACCTGT GGTCGGGCCG CGAGCCCGAC
CGGGCCACGG CGGTCTGCCG GTTTTGCGAC ACCGATTTTG TCGGCACCGA CGGCACGCTG
GGCGGCAAGT TCAAAAATGC CGAAGCGCTG GCGGGCTGCA TCGAAGCCCA GTGGCCTGCC
GGCGACAGCG CCCACCGCTT CGTGGTGATG ACCGGCGGCG AGCCGCTGCT GCAGGTCGAT
GGCGCGCTGA TCGCTGCGCT GCATGCGCGT GGTTTTGTGA TTGCCGTGGA AACCAACGGA
ACGATTGCCG CGCCGCCGGG CATCGACTGG ATCTGCGTCA GCCCCAAGGC CGGCGCACCG
TGGATTCAGC GCGAAGGCCA TGAACTCAAG GTGGTCTGGC CGCAGCCAGC GCTCGACTGG
GCCGAACTCG AAGCCGCGCG CTTCACGCAC CGCTACCTGC AGCCGATGGA CAATCCCGCG
TGGCGCAACA ATACCGAAGC CTGCATCGCG CTGTGCCTGG AAAATCCCGC CTGGCGGCTC
AGCTTGCAGA CGCACAAGAT CACGGGCATC CGATGA
 
Protein sequence
MSYQVKEIFY TLQGEGSHAG RPAIFCRFAG CNLWSGREPD RATAVCRFCD TDFVGTDGTL 
GGKFKNAEAL AGCIEAQWPA GDSAHRFVVM TGGEPLLQVD GALIAALHAR GFVIAVETNG
TIAAPPGIDW ICVSPKAGAP WIQREGHELK VVWPQPALDW AELEAARFTH RYLQPMDNPA
WRNNTEACIA LCLENPAWRL SLQTHKITGI R