Gene Pnap_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1041 
Symbol 
ID4687474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1103146 
End bp1104432 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content70% 
IMG OID639834040 
Producthypothetical protein 
Protein accessionYP_981279 
Protein GI121603950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA TCGAAAAACA GGCAACCCGA CCTACCGCAT CCACTCCGTC GGGCGCCTGG 
CCCATCGCAC TGGCCGGGCT GGTGGCGCTG GCCGTGGCCA TGGGCATAGG CCGGTTTGCC
TTCACGCCCA TCCTGCCCAT GATGCTCAGC GACGGTGTGG TCGATCTGCC GGGCGCCAGC
TGGCTGGCCA GTGCCAACTA CCTGGGCTAC ATGCTGGGCG CCATTTTTTG CACGCTGCAG
CCGTGGATCT GGGCGCGTCT GCGCTGGCTG CCCTTGCTGG CCTATGCGTC GCTGGTGCGT
GCCGGGCTGC TGGCCACCGG CGCGCTGACG CTGGCCATGG CGTGGCAGTT GCCGGCCGCC
TGGCCGGTGC TGCGCCTTGC CGCCGGCATC ACCAGCGCGG TGGTGTTTGT CTATACCTCG
GGCTGGTGCC TTGCCCGCCT GTCGCGGCTG GGCGTGCCGG CCATGGGCGG CGTCATTTAC
GCCGGTCCGG GCGCGGGCAT TGTCGTCAGC GGCCTGCTGG CCAGCGGCAT GGTGTCCCTG
CACTGGACGG CGGCCACCGG CTGGCTGATT TTTGGCGTGC TGGCGTTCGG GCTGTCGGCC
ACGGTCTGGC AGGTTTTTGA CGGCGGAAAT GAACGCCTGG CCCCGCGTGC CCTGCATGCG
CCAGGGGTGC CCGGCTCGGA GTCCGTTCGC CACGGCGTGG CTGAAGTCAC CGTTTTCAGC
TTGGCCTATG GCCTGGCCGG CTTCGGCTAC ATCATCAGCG CCACCTTTTT GCCGGTGATT
GCCCGCGCCG CGCTGCCCGG TTCGGCGTGG CTGGACCTGT TCTGGCCGCT TTTCGGCCTG
GGCGTCACCC TGGGTGCGCT GCTGGCCACC CGCCTGCCGC CCGGAAAAGA CTTCCGGGGC
CTGCTGGCGG GCTGCTATGT CCTGCAGGCG GCCGGCATCG CGGCCAGCCT CTGGAGCCCC
AGCCTGGCCG GCTTTGCCAT CGGCAGCCTG CTGCTGGGCC TGCCGTTCAC CGCCATCACC
TTTTTTGCGA TGCAGGAGGC GCGGCGCCTG CGTCCGGCCA GCGCCGCCAG CTTCATGGGG
CTGTTGTCCG CGACCTATGG CGTGGGGCAG ATTCTCGGCC CGCCGCTGGT GGCGCTGCTG
CTCAGGCATG CCGCGAGCAC CGGCGAGGGG TTCACCCTGT CGCTGGAAAT CGCGGCCGGC
ACCTTGCTGG CCGGTGCGCT GCTGTTCGGC TGGATGGCCA GGGCTTACCC GGTGCAGCGG
CGAGGCGAAG CCCCCGCACG GGCTTGA
 
Protein sequence
MALIEKQATR PTASTPSGAW PIALAGLVAL AVAMGIGRFA FTPILPMMLS DGVVDLPGAS 
WLASANYLGY MLGAIFCTLQ PWIWARLRWL PLLAYASLVR AGLLATGALT LAMAWQLPAA
WPVLRLAAGI TSAVVFVYTS GWCLARLSRL GVPAMGGVIY AGPGAGIVVS GLLASGMVSL
HWTAATGWLI FGVLAFGLSA TVWQVFDGGN ERLAPRALHA PGVPGSESVR HGVAEVTVFS
LAYGLAGFGY IISATFLPVI ARAALPGSAW LDLFWPLFGL GVTLGALLAT RLPPGKDFRG
LLAGCYVLQA AGIAASLWSP SLAGFAIGSL LLGLPFTAIT FFAMQEARRL RPASAASFMG
LLSATYGVGQ ILGPPLVALL LRHAASTGEG FTLSLEIAAG TLLAGALLFG WMARAYPVQR
RGEAPARA