Gene Pnap_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1035 
Symbol 
ID4689695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1095396 
End bp1096916 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content65% 
IMG OID639834034 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_981273 
Protein GI121603944 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.22588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC ACCCCATTGT TGTTCAGCCC GCCGCCAGGA CTCTCCGCTT CATCCGCAGG 
GGCGAAGTGG TGAATCTGGG CAATGTACCA CCCGGGCGCA CCGTTTTGGA GCTGCTGCGC
GAAGACCTCG GCTGCACCGG CACCAAGGAA GGCTGCGGCG AAGGCGACTG CGGCGCCTGC
ACCGTCGTGC TCGGCCAGAT CGAGGACGGC GCCCTGCGTT TTCGCGCCAT CAACAGCTGC
ATCCGGCTGG CGCATTCGAT TGACGGCATG GCGCTGTGGA CGGTCGAGGA CATTGCCGAG
CAGGACGGCA CCCTGCATCC GGCGCAGCAA GCCATGGTGC AGTGCCACGC CTCGCAATGC
GGCTTTTGCA CGCCCGGCTT CGTCATGAGC CTGTTCGGCA TGTATCAGAA CTATGTGGCC
CCCACGCTCG GCCCGGCGGC GTTGAATGCC ACGTCCCAGC CCATCACGCG GGCGCTGGCG
CAAGAGGAAC TCTCGGGCAA CCTGTGCCGC TGCACCGGCT ACCGGCCGAT TCTGGACGCC
GCGCAAATCA TGGGCAGCCT GCCGCCCGTG GCAATCGACC ACGACACCTT GCTATCAAAA
CTGGAGCTGC TCGCGCAAGC TGGCTATGCG CAAGAGGTCG ATTCGGCTTA TAAATTGCCG
TACACGCTGG CCGATCTGCT CAAGGACCGC GCCGCCCACC CGACAGCGCA GCTCGTGGCC
GGCTGCACCG ATGTGGGCCT GTGGGTGACC AAGCAGCACC GCCAGTTCGG CGAAATCCTC
GACCTTACCC AGGTGGAGGA GCTGCGCCAC ATTGAAGACC AGCCCGACCA CCTGTTGATA
GGCGCGGCGG TGACGCTGGC CGATGCCTTT GGCGCGCTGA TCAAGGACCG GCCGCAGCTG
CACAACTTCG CCAGCCGCTT TGCCGGGCTG CCAGTGCGCA ACTCCGGCAC GCTGGGCGGC
AACATCGCCA ACGGCTCGCC GATTGGCGAC TCGATGCCGC TGCTGATCGC GCTGAATGCC
CGGATCGTAC TGATGAGCGA GCATGGCCAG CGCGAGATGG CGCTCGAAGC GCTCTACACC
GGCTACCGGC AAACCGTGAT GGCGGCCGAT GAAGTGCTGG CCTTTATCCG GGTGCCCAAA
GCCACGCCAG AGGAGACGCT GAAGGTTTAC AAAATCTCAA AGCGCTACGA CGACGACATT
TCCGCCGTCT GCCTGGCCAT CAAGCTGCAC ATTGACCAAG GCGTCGTGGC CCGTGCGTCC
ATCGGCGCGG GCGGCGTGGC GGCAACGCCG GCCAGAGCCG TCCAGACTGA AGCCTTCCTG
ACCGGCCAGC CGTGGACGCT GGACACCGTG CGGCAGGCCA TGAATGTGCT GCGCGCCGAG
TTTTCGCCGA TTTCCGACAT GCGCGCCTCC AGCGCCTACC GCACCGAAGT GCTGGGCAAG
CTGCTTGAGC GCTACTGGCT GGAGAGCCAG GGAATGCAGC AGATCAACCT GGCCTCTTTC
ATGCTGGAAG AAACGCCATG A
 
Protein sequence
MTTHPIVVQP AARTLRFIRR GEVVNLGNVP PGRTVLELLR EDLGCTGTKE GCGEGDCGAC 
TVVLGQIEDG ALRFRAINSC IRLAHSIDGM ALWTVEDIAE QDGTLHPAQQ AMVQCHASQC
GFCTPGFVMS LFGMYQNYVA PTLGPAALNA TSQPITRALA QEELSGNLCR CTGYRPILDA
AQIMGSLPPV AIDHDTLLSK LELLAQAGYA QEVDSAYKLP YTLADLLKDR AAHPTAQLVA
GCTDVGLWVT KQHRQFGEIL DLTQVEELRH IEDQPDHLLI GAAVTLADAF GALIKDRPQL
HNFASRFAGL PVRNSGTLGG NIANGSPIGD SMPLLIALNA RIVLMSEHGQ REMALEALYT
GYRQTVMAAD EVLAFIRVPK ATPEETLKVY KISKRYDDDI SAVCLAIKLH IDQGVVARAS
IGAGGVAATP ARAVQTEAFL TGQPWTLDTV RQAMNVLRAE FSPISDMRAS SAYRTEVLGK
LLERYWLESQ GMQQINLASF MLEETP