| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1029 |
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| Symbol | |
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| ID | 4687265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1088888 |
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| End bp | 1089538 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834028 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_981267 |
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| Protein GI | 121603938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.938438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGT TTCTGCACCA TGCCCGGGAG TTCATGCCCA TCCTGCTCCA GGGGGCCTGG
CTCACCATCC TCGTGACGCT GGGCTCCTTG CTGCTGTCCA CCGTGCTGGG CCTGGTGTGG
GCCGTCATGC GCGTGTCCGG CATTCCGCTG CTGGCCAACC TGAGTGCCGC CATCATCAAT
CTGCTGCGCG GCATCCCGAT CATCGTGATT TTGTTTTTCC TGTACTTCGT GATGCCCGAC
GTCGGCATCT CGCTGTCGGC GCTGCAGGCC GGCATCCTCG GCCTGGGCAT CGCCTATTCG
GCCTACCAGG CCGAGAATTT CCGCGCCGGC ATCGAAGCGG TGGACCATGG CCAGGTCGAG
GCGGCGCGGG CCATGGGCAT GGGCTGGGGG CTGATGATGC GCCGCGTGGT GCTGCCGCAG
GCCGTCAAGA TCGTGCTGCC GCCCTACGGC AACATCATGA TCATGATGCT CAAGGATTCG
TCGCAGGCCT CGACCATCAC GGTTGCCGAG CTGGCGCTGC AGGGCAAGAT GATCGCTACC
TCCACCTTCC AGAACGCCAC CGTTTTCACG CTGGTCGCGC TGATTTACCT GGTCATGTGC
GTGCCGCTGA TTCTGCTGGT GCGCCATCTT GAGAAGCGGG GCAAAAAATG A
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| Protein sequence | MTQFLHHARE FMPILLQGAW LTILVTLGSL LLSTVLGLVW AVMRVSGIPL LANLSAAIIN
LLRGIPIIVI LFFLYFVMPD VGISLSALQA GILGLGIAYS AYQAENFRAG IEAVDHGQVE
AARAMGMGWG LMMRRVVLPQ AVKIVLPPYG NIMIMMLKDS SQASTITVAE LALQGKMIAT
STFQNATVFT LVALIYLVMC VPLILLVRHL EKRGKK
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